Opisthocomus hoazin (hoatzin): 104336773
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Entry
104336773 CDS
T08436
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oha03000
]
104336773 (SOX30)
Transcription factors [BR:
oha03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104336773 (SOX30)
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104336773
NCBI-ProteinID:
XP_009940937
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All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MSSSSCITEPWRGAAIKVDLPDKAFEACWEKVEKNEGPTGSLGGPAHAGTDDREAKPCEG
FGILPEDLKIPVVFQPLSPAAPVQIQDPLPQELIHVTKAPVTAVPLKMQPLLRPSVKTET
KNVPLTVLPSDSGMPDTPFSKDKSGHVKRPMNAFMVWARIHRPALAKANPTANNAEISVQ
LGLEWSKLTEEQKQPYYDEAHKIKQKHREEFPGWIYQPRPGKKKRFPLPVSAVFSGTSQS
IISTNPSGICPFQSPAYSVVIPNVKNSIGHPVCESPAIRLPASSIQPAGPITLLRTTSAS
TASVAVPAPALTLRPIISPQHFAEPAQTEAFGVSSGLNCSPKRPTPVFMESFGRSPSNIT
NASGTFSVPNSEPPKECPGVSVFPRGIPLPQATPFLHSRLYGPPPVGQPASLFGVPPRFS
FHHPYFVSGPHYFPSSTCPFSRPPFGCGNFSSSVPECLGFYEDKYPREEVMFSALDGNYP
FKECSAESIHEGRGSCEGPGVVSCHSSCNEERYLSPLPQLDVGALQEVLSPPATPSSVHL
INVIDSDEEEEVKLLQEL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccagttcttgcatcacggagccttggagaggagccgccatcaaggtggacctg
ccggacaaggcctttgaggcctgctgggagaaggtggagaagaacgaaggccccactggc
tccctgggtgggcccgctcacgccggcactgacgaccgcgaggcgaagccatgtgagggg
ttcgggatcctccctgaagacctgaagatccccgtcgtgtttcagcccttgtctcctgcc
gcccccgtgcagatccaagacccgctgccgcaggagctgatccatgtgacgaaagcgccg
gtgacagcagtgccgcttaaaatgcagcctttgctaaggccttcagtaaagactgaaact
aaaaatgttcccctcacagtactgccctctgattcaggtatgccagatactccatttagc
aaggacaaaagtggccatgtaaagcgtccaatgaacgcgtttatggtgtgggcgaggatt
catcggcccgccctagcaaaagctaacccaactgccaataacgcagaaatcagtgttcag
cttggactggagtggagcaaactgactgaagagcagaagcagccctattatgatgaagct
cacaaaataaaacaaaagcacagagaggaatttcctggttggatttatcaaccacgacca
ggcaaaaagaagcgttttccactgccagtctctgctgtattttccggcacttctcagagt
atcatctctacaaatccatctggcatttgtcccttccagtcacctgcttactctgttgtc
atccccaatgttaagaacagtattggacatccagtctgtgagtctcctgccatccgtctg
ccggcttcttccattcaacctgctggtccaattactcttctccggactactagtgcaagc
acagcatcagtggctgttccagctccagccctgaccctgcgccccataatttcaccacag
cactttgccgaacctgctcaaacagaagcttttggtgtatcatctgggctcaattgctct
ccgaagagacctacaccagttttcatggagagcttcggcagaagcccaagtaacataacc
aacgctagtggcacgttttctgtccctaacagtgagcccccaaaggagtgcccaggggtt
tctgtttttcctagagggatacctcttccccaagctaccccttttcttcactcacgtctc
tatgggccccctcccgttggtcagccagccagcctgtttggagtacctcctcggttttca
tttcaccacccttactttgtatctggacctcactatttcccctcaagcacatgcccattc
agccgaccgccatttggctgtgggaacttctccagctcagtgcctgaatgccttggcttt
tatgaagacaagtacccaagagaggaggtgatgttttcagctctggatggaaactatcct
ttcaaggaatgctcagcagaaagtatacacgagggccgcggcagctgtgagggccctgga
gtagtgtcctgccacagcagctgcaatgaggagcggtatttgagccccctgccacagctg
gacgtcggagcattgcaggaggttttgtcacccccagccactccctccagtgtccacctc
atcaatgtaattgacagcgacgaggaagaggaagtaaagttgttgcaagaattgtaa
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