Opisthocomus hoazin (hoatzin): 104336830
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Entry
104336830 CDS
T08436
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04137
Mitophagy - animal
oha04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104336830 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104336830 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104336830 (VCP)
03009 Ribosome biogenesis [BR:
oha03009
]
104336830 (VCP)
04131 Membrane trafficking [BR:
oha04131
]
104336830 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oha04147
]
104336830 (VCP)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104336830 (VCP)
Ribosome biogenesis [BR:
oha03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104336830 (VCP)
Membrane trafficking [BR:
oha04131
]
SNARE
SNARE associated proteins
Others
104336830 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104336830 (VCP)
Exosome [BR:
oha04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104336830 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
TsaE
NB-ARC
ResIII
Viral_helicase1
SLFN-g3_helicase
NACHT
Sigma54_activat
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
104336830
NCBI-ProteinID:
XP_009940998
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MPGGPEAASKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVL
LKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLP
IDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAP
DTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPP
RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR
RFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEA
ALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWED
IGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAAD
RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK
ANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPS
AMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQ
GGAGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcgggccagaggctgcttctaaagcggatgacttatcgactgccattctgaag
cagaagaacaggcccaatcggctaattgttgatgaagccatcaatgaagacaacagtgtt
gtgtcactgtcacaggcaaaaatggacgaattgcagctgttcagaggagacactgtcctg
ctaaaaggaaagaagaggagagaagcggtctgcattgttctgtcagatgatacctgctca
gatgagaagattcgcatgaatagggttgttcgcaacaacctgagagtgcgcctgggtgac
gtgatcagcatccagccgtgtccagatgtgaaatacggcaaacgtatccatgtgctgccg
attgacgacacggtagaaggcatcacagggaatctgttcgaggtctatctcaagccatac
ttcctggaagcgtacagacccatcaggaaaggtgacatcttcttggtgcgtggagggatg
cgtgcagtggagttcaaagtggtggagacagatccaagtccgtactgcatagtggctcca
gacacagtgatccattgtgaaggagagcccatcaaacgagaggatgaagaggagtcactg
aatgaagtgggctatgatgacattggtggttgccggaagcagctggctcagatcaaagag
atggtggaacttcccctccgacaccctgcgctcttcaaggccataggggtgaagcctccg
cgtgggatcctgctgtatggtcctcctggcactggtaaaacactgattgcccgagcggtg
gccaatgagacaggggctttcttctttctgatcaacggtcctgagatcatgagcaagctg
gctggtgagtctgagagcaacctgaggaaagcctttgaagaagcagagaaaaacgctcct
gccatcatcttcattgatgaactggatgccattgcccctaagagagagaagacacatggg
gaggtggaacgtcgcatagtgtctcagctgttgactcttatggacggactgaaacagcga
gcacacgtgattgttatggcagctaccaacagacccaacagcattgacccagcactcagg
cgatttggtcgttttgacagagaggtagatattggtatcccagatgccaccgggcgcctg
gagatcctgcagatccacacaaaaaatatgaaactggctgatgatgtggatctggagcag
gtggcaaacgagacccatggccatgttggtgctgacttggctgctctttgctcagaagct
gctcttcaggctatcagaaagaagatggatctcatagacctagaagatgaaaccatcgat
gctgaagtgatgaactcgctggctgtgaccatggatgacttcaggtgggctctgagccag
agcaacccttctgctcttcgggagactgtggtggaggtgcctcaggtcacctgggaagat
attggtggtctagaggatgtaaagagagaactccaggagcttgtacagtatcctgtggag
cacccagacaagttcctcaaatttggtatgactccatcaaaaggcgttctgttctacggg
ccacctggttgtggtaagacgctgctggcgaaagccattgccaacgaatgccaggcaaac
ttcatttccatcaaggggccggagttgctcaccatgtggtttggagagtctgaagccaat
gtgcgtgagatctttgacaaggcccgccaagcagcaccttgtgtgctcttctttgatgag
ctggactccatcgcaaaggctcgaggtgggaatattggcgatggtggtggtgctgcagac
cgcgtcatcaaccagatcctgacagagatggacggcatgtccaccaagaagaacgtcttc
atcatcggtgccaccaacaggccagacatcattgacccagcgatcttgcgccccggacgc
cttgatcagctcatctacatccccctgcctgacgagaagtcccgggttgctattcttaag
gccaacctgaggaaatcaccagttgccaaggatgtcgacctggatttcctagctaagatg
accaatggcttttcgggggccgacctgacagaaatttgccagcgtgcctgcaaactggcc
atccgcgagtccatcgagagtgagatcagaagagagcgcgagaggcagaccaacccttcc
gccatggaggtggaggaggacgacccagttcctgagatacgcagggatcactttgaggag
gccatgcgcttcgctcgccgctctgtcagtgacaacgacatcaggaaatacgagatgttt
gcacagaccctacagcagagccgtggctttggcagcttcaggttcccgtcgggcaaccag
ggcggcgctggcccgagccaaggcacaggaggcggcagtgggggcaacgtgtacagcgag
gacaacgacgatgatctctacggttaa
DBGET
integrated database retrieval system
