KEGG   Opisthocomus hoazin (hoatzin): 104337206
Entry
104337206         CDS       T08436                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
oha  Opisthocomus hoazin (hoatzin)
Pathway
oha03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:oha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    104337206 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oha03400]
    104337206 (WDR48)
DNA repair and recombination proteins [BR:oha03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     104337206 (WDR48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_IP5PC_F WDR54 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_HPS5 RAWUL WD40_like Nucleoporin_N Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 104337206
NCBI-ProteinID: XP_009941402
LinkDB
Position
Unknown
AA seq 667 aa
MTEVVLVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIAS
MEHHTDWVNDIVLCCSGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKE
LVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEK
VLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRV
HDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMELDRSADPPP
ALWVATTKSSVNKWTLKGIHNFRASGDYDNDCTNPIPPLCTQPDQVIKGGASIIQCHILN
DKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWFSVDLKTGMLT
ITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHINPMDEEENEIN
HVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWV
IDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNE
SQTTSSSNNEKAGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHFIWKSGGDLTL
HYRQKST
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgactgaggtggtgttggtttcctatgtgattagagatgaagtggagaagtataatcga
aatggggtaaatgcacttcagctggatccagcattaaacagactcttcacagcaggccga
gactccattataaggatatggagtgtcaatcagcacaagcaagacccttatatagcatct
atggaacatcacacagattgggtaaatgatattgtgctctgctgcagtggtaaaacattg
atatctgcttcttcagatactactgttaaagtgtggaatgcacataagggattttgcatg
tcaacgctaaggacacataaggattatgtgaaagccttagcgtatgcaaaagataaagaa
ctggtagcatctgctggactggacagacagatattcctctgggatgtgaatactctaaca
gcactgactgcctcaaataacaccgtaacaacttcttccctgagtgggaacaaagattct
atctacagcctcgcaatgaatcaaatgggaacagttattgtatcggggtccactgaaaag
gttctaagggtgtgggatccgagaacttgtgcaaaactaatgaaactcaaagggcacacg
gacaatgtaaaagctttgttgttgaacagagatggcacccagtgtctttcaggcagctct
gatgggactatccgcctgtggtcccttgggcagcagagatgtatagccacataccgagtc
catgatgaaggtgtttgggctctgcaggtcaatgaagccttcactcatgtttactcagga
ggaagagacaggaagatttattgtacagatttacgaaatcctgatatccgtgtgcttatc
tgtgaagaaaaggcaccagttcttaagatggaacttgatagatcagctgatcctcctcca
gcactttgggttgcaacaactaaatcctctgtcaataaatggactttgaagggaattcat
aattttagagcatctggagattatgataatgattgtaccaatcctataccacccctgtgc
acacagcctgaccaagttataaaagggggtgctagtattattcagtgccacattcttaat
gacaagagacacatattaaccaaagacacaaataataacgtggcatactgggatgtcttg
aaggcatgtaaagttgaagatcttgggaaagtagattttgaagaagaaattaagaagaga
tttaaaatggtgtatgtgccaaactggttctcagtagacttgaaaactgggatgttgaca
attactctggatgaaagtgactgctttgcagcgtgggtttcagcaaaggatgctggattt
agcagtccagatggttctgatccaaaattaaacctgggagggcttctgctacaagcactt
ctggagtattggcctagaacacatatcaatccaatggatgaagaagaaaatgaaataaat
catgtgaatggtgaacaggagaacagagtccagaaaggaaatggatacttccaagtgcca
ccacatacaccagttatttttggtgaggctggaggacgcactttgttcaggttattatgt
cgggattcaggtggtgaaacagaatctatgcttcttaatgaaactgtgccacaatgggta
attgacatcactgtggataaaaatatgcccaaattcaataagattcccttctacctccaa
cctcattcatcatcaggggcaaaaactctaaaaaaagaccgactgtcagcgagtgatatg
cttcaggtgaggaaagtgatggaacatgtgtatgagaaaatcataaacttggataatgag
tctcagacaactagctcttccaataatgaaaaagcaggagaacaagaaaaagaggaggac
attgctgtgctagcagaggagaagattgaacttctgtgccaggaccaggttttagatccg
aatatggaccttcgaactgtaaagcacttcatttggaagagtggtggtgatctgacactt
cattatcgccagaagtcaacgtga

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