Opisthocomus hoazin (hoatzin): 104337291
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Entry
104337291 CDS
T08436
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oha03037
]
104337291 (IFT88)
Cilium and associated proteins [BR:
oha03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
104337291 (IFT88)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_8
TPR_19
TPR_14
TPR_16
TPR_6
CFAP70_TPR_C
ANAPC3
TPR_11
RMD1-3
ARM_TT21_4th
TPR_9
TPR_10
DUF6340
TPR_17
TPR-S
TPR_CcmH_CycH
ARM_TT21_5th
TPR_YpiA_C
CNOT10_TPR
TPR_15
TPR_21
ARM_TT21_C
CFAP70_mid_TPR
DUF6584
TPR_24
RMD9_mid
HAT_PRP39_C
TTC22_N
FumaraseC_C
Coatomer_E
ARM_TT21_2nd
TPR_INTS8
NBD_SMAX1
GnHR_trans
Motif
Other DBs
NCBI-GeneID:
104337291
NCBI-ProteinID:
XP_009941498
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MFHSKMMQNVHLAPEADEDDLYSGYNDYNPTFDMEDLENDVAFQQAARTSHGRRPPLTGK
IPGTSASRPLATGFGSKATLTSSMGRPVTGAVQDGVARPMTAVHAAGYTKTAMRGSSFDP
LGQARGPAPPLEMKNSDGSEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKE
RVLVRQREQIATSENINLDLTYSVLFNLASQYAANEMYAEALNTYQVIVKNKMFSSGGRL
KVNMGNIYLKQRNYSKAIKFYRMALDQIPSAHKEMRIKIMQNIGVAFIKTGQYADAISSF
EHIMSMSPNPMAGFNLILCYFALGNGEQMKKAFQKLIAVPLEVDCDDKYISPNDDPHTNL
LIEAIKNDSLRQIERERKSMAEEYIMTAAKLIAPVIETSFAVGYDWCVEVVKASHYVELA
NDLEINKATTYLRQQDFNQALETLKMFEKKDSRVKSAAATNLSFLYYLENELAQATNYAD
LAVNSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLNRI
DEALDCFLKLHAILRNSAQVLHQIANIYEIVEDPTQAIEWLLQLISVVPTDPHVLSKLGK
LYDTEGDKSQAFHYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQV
KWQLMVASCYRRSGNYQKALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYMTKLK
KVEKLKEIREQRIKSGRDGSARSRREGNAGGDSGGTKGERLSAKLKVLPGTSEPYESSGS
KEIDASYMDPLGPQAERPKTAARKRTEEDDFADEELGEDLLPE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacagcaaaatgatgcaaaatgtgcatctggctcctgaggctgatgaagatgat
ctttattctggctacaatgattataatcccacgtttgacatggaggatttagaaaatgat
gtagcttttcaacaggcagcaagaacaagtcatggtagaagaccccctttgacaggcaaa
attcctggtacatcagcttcaagacctttagctactggatttgggtcaaaggcaacatta
acttcatctatgggaagaccagtgacaggagctgtgcaggatggcgttgctcgaccaatg
acagcagtgcatgctgcaggttacacaaagacagctatgagaggttcttcatttgatcct
cttggccaagcaagaggtcctgctccacctctggaaatgaaaaattcagacggttcagaa
gagaagattaggcagttggaaaaaaaagtgaatgaactggttgaagaaagctgcattgcc
aacagctgtggagacttgaaattggctctggaaaaagcaaaggaggctggaagaaaggaa
agagtattggtgagacaacgtgaacaaattgctacttcagaaaacatcaacttagacctc
acttattcagttcttttcaatctggccagtcagtatgctgctaatgaaatgtatgctgaa
gctctgaatacttaccaagttatagtgaagaataagatgttcagcagtggaggtagactg
aaggtgaatatgggaaatatatatttaaaacaacgtaactattccaaagctatcaaattc
taccgtatggctctagaccagattcctagcgcccacaaagagatgaggattaaaataatg
caaaatatcggagttgcatttattaaaactggccaatatgctgatgccatttcttcattt
gaacatataatgagcatgtccccaaacccgatggcaggcttcaacttgatcctatgttac
tttgctcttggaaatggtgaacaaatgaaaaaagccttccaaaagctgattgcagttccc
ttggaagtggattgtgatgacaaatacatttcaccaaatgatgatccacatacaaatcta
ttgattgaagccattaaaaatgacagcttaagacaaatagaacgtgagaggaaatccatg
gcagaggaatacattatgacagctgctaagctcatagcaccagtaattgagacatctttt
gcagtaggctatgactggtgtgttgaagtagtaaaagcttcccactatgtagagctagcc
aatgacctggaaataaataaagccactacttacttgaggcagcaggattttaaccaggca
ctggagactttaaaaatgttcgaaaaaaaggatagcagagtaaagagtgcagctgcaaca
aacctttcattcctttattatttggagaatgaattggcacaagcaactaactatgcagat
ttagctgtaaattctgataggtacaatccagcagctctaactaacaaaggaaatactgtt
tttgcaaatggagactatgaaaaagcagctgagttttataaggaagctctcaggaatgat
tcttcgtgcactgaagcactttataatcttggtttaacatacaagaagttaaatagaata
gatgaagctttggattgttttctgaaactccatgcaatccttcgaaatagtgcccaagtc
cttcaccagatagcaaacatatatgaaatcgtggaagatcccactcaagcgattgagtgg
ctcctgcagttgatcagtgtagtaccaactgatccacacgtactttcaaagctggggaaa
ttatatgatactgaaggtgataaatcccaagcttttcattattactatgagtcgtaccgg
tatttcccttcaaacattgaggtcattgaatggcttggagcctattacattgacactcag
ttttgtgaaaaagccattgagtactttgaaagagcagcacttatcctaccaacacaagtg
aaatggcagctgatggttgccagttgctacaggagaagcggtaactaccagaaagctcta
gagaaatacaaagtcattcacagaaaattcccagagaatgttgaatgcctccgattttta
gttcgtctctgcacagatatggggctgaaagaagtccaggaatatatgacaaagctcaag
aaagtggaaaaattaaaagaaataagagagcagcgcataaagtctggcagagatggcagt
gcacgtagccgcagagaaggaaatgctgggggtgacagtggtggtaccaaaggggaaaga
ctgagtgccaaactaaaagttttgcctggaacaagcgaaccctatgaaagcagcggcagt
aaagaaatagatgcctcctacatggatccacttggcccacaagcagaaagaccgaaaact
gcagcaagaaaaagaactgaggaagatgactttgctgatgaagaactaggagaggatttg
cttccagaatag
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integrated database retrieval system
