Opisthocomus hoazin (hoatzin): 104337356
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Entry
104337356 CDS
T08436
Symbol
ROBO1
Name
(RefSeq) LOW QUALITY PROTEIN: roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104337356 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oha04515
]
104337356 (ROBO1)
Cell adhesion molecules [BR:
oha04515
]
Immunoglobulin superfamily
ROBO family
104337356 (ROBO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
C2-set_2
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_VSIG10L2_N
Big_4
DUF7908
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
104337356
NCBI-ProteinID:
XP_009941575
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MKWKHYPFLVIVAVFSLSRCHQLLGQLIPDSDDLERGSDSGTPLPTSDNGDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTXXXXXXXXXXXXVETDKDDPRS
HRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPS
DVMVAVGEPAVMECQPPRGHPEPTISWKKDGTPLDDKDERITIRGGKLMITYTRKNDAGK
YVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRK
DDGELPKARYEIRDDHTLKIWEVMAGDMGSYTCVAENMVGKAEASATLTVQVVSEPPQFV
VKPRDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLT
ITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVL
NCVATGTLMPTILWKKDGILISTQDSRIKQLETGALQIRYAKLGDTGRYTCIASTPSGEA
TWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSY
IIEAFSHASGSSWQTVAENVKTESFAVKGLKPNAIYLFLVRAANAYGLSDPSQISDPVKT
QDVPPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPT
PASYGESEWLIFEVRTPTKNSVIIPELKKGVNYEIKARPFFNEFQGADSEVKFAKTLEEA
PSAPPQSVSVTKNDGNGTAIVVTWQPPPEDNRNGMVQEYKVWCLGNESRYHINKTVDGST
FSVVIPSLVPGIRYSVEVAASTGAGPGVKSDPQFIQLGKPAGNPAYRFQ
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaacattatccttttttggtcatagtagctgtattcagcctttccagatgc
catcagttactgggtcagctcattccagactctgacgacctagagaggggaagcgacagc
gggacacctctccccacctctgataatggcgacaattcgctgggctacacaggctcccgt
cttcggcaagaagatttcccacctcgaattgtcgaacacccttctgatctaattgtttcc
aaaggagaaccagcaactttaaactgtaaagcagaaggaaggccaacccccacnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnngagtagaaacggacaaggatgatccgcgctcc
caccgcatgctgctgcccagcggatctttatttttcttacgcatagtccatgggcgcaaa
agtcggccagacgaaggggtctatgtctgtgtggcaaggaattaccttggggaagctgta
agtcataatgcatcactggaggtggcaattctacgggatgacttcagacaaaatccgtca
gacgtaatggtagctgtgggtgaacctgcagtgatggaatgtcagcccccgagaggtcac
ccagaacccactatatcatggaaaaaagatgggaccccactagatgacaaagatgagaga
attacaatcagaggaggaaagcttatgatcacatacacaagaaagaatgatgctggcaaa
tatgtttgtgttggaacaaatatggttggagaacgtgaaagtgaagttgcggagctcact
gttttagagaggccatcttttgtgaagaggccaagtaatctggctgtaactgtggatgat
agtgcggagtttaagtgtgaagcaagaggtgacccagtccctacagtaagatggaggaaa
gatgatggggaattaccaaaagcaagatatgaaatccgtgatgatcataccttgaaaatc
tgggaagttatggcaggagacatgggctcgtatacttgtgttgcagaaaatatggttgga
aaagctgaagcatcagcaactctaacagttcaagttgtgtctgagcctccacagtttgtt
gtgaagcctcgagaccaggtggctgcactggggagaacagtgactttccagtgtgaagct
actggaaacccccagccagccatcttttggcggagagagggaagtcagaatctgcttttc
tcgtaccagccccctcagtcatccagccgattttcagtttcccagacaggtgacctcact
atcaccaacgtccagagatctgatgttgggtactatatctgccagactttaaatgttgcg
ggaagtatcataacaaaagcctacttggaagttactgatgtgattgcagaccggcctccc
cctgtcattcgacagggtcctgtgaatcagactgtagctgtagatggtactttagtactg
aactgcgtggccacaggcactttaatgcccactatcctctggaaaaaggatgggatcctc
atttctacccaggactctcgcatcaagcagttggagacaggagcattacagatccgatat
gccaagctgggcgacactggtcggtacacctgcattgcttcaaccccaagtggcgaagct
acgtggagtgcatacatagaggtccaagagtttggagtcccggtgcagccgccaagaccc
actgacccaaacttgattcctagtgctccatcaaaacccgaggttacagatgtcagcaga
aatacagtgacattgtcatggcaacctaatttgaattcaggtgcaacaccgacctcttac
ataattgaggccttcagccatgcatctggtagcagctggcaaactgtagctgaaaatgtg
aaaacagagagttttgcagtcaaagggctaaaacctaatgcaatttatctattccttgtg
agggcagctaatgcatatggactaagtgaccccagccaaatatctgatccagtgaaaact
caagatgttccaccaacaagtcaaggtgtggatcacaagcaggtccaaagagaactgggt
gatgtggtactacatctgcacaatcctactatcctttcttcttcctcaattgaagttcac
tggactgtggaccagcaatcccagtatattcagggatacaaaatcctgtaccggcccacg
ccagcatcctatggagagtcagagtggttaatctttgaagtgaggactccaaccaaaaac
agcgttatcattcctgagctgaagaaaggtgtaaactacgaaatcaaggcccgccctttt
tttaacgagtttcagggagcagatagcgaagtgaaatttgcaaagaccctggaagaagct
cctagtgctccacctcagagtgtttccgtaactaagaacgatgggaacgggacagcaatc
gtggtcacctggcagccgccccctgaggacaaccggaacgggatggttcaagaatataag
gtttggtgtcttggcaatgaaagtcgataccatataaacaagacggtagatggttccacc
ttttctgtagtcatcccctccctagttcctggtattcgatatagcgtggaagtggcagca
agtactggggcaggacctggagtgaaaagtgatcctcagtttatccaattaggtaagcct
gctgggaatcctgcctatcggtttcaatga
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