Opisthocomus hoazin (hoatzin): 104337505
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Entry
104337505 CDS
T08436
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03018
RNA degradation
oha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104337505 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
104337505 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104337505 (LSM8)
03041 Spliceosome [BR:
oha03041
]
104337505 (LSM8)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104337505 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
104337505 (LSM8)
Spliceosome [BR:
oha03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104337505 (LSM8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
104337505
NCBI-ProteinID:
XP_009941760
LinkDB
All DBs
Position
Unknown
AA seq
109 aa
AA seq
DB search
MNVSENINSSISGICKHFFNELSGTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFS
SSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVVH
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttcagaaaatattaatagttctatttcaggtatctgtaagcatttctttaat
gaattgtcaggtactgttgcagtaattacttctgacggaagaatgattgtgggaaccctc
aaaggttttgatcagaccattaacttgattttggatgaaagccatgaacgagtgttcagt
tcttcacaaggagttgagcaagtagtgctgggattatacattgtaagaggtgataatgtt
gctgtcattggagaaattgatgaagagacagattcagctcttgacttggggaatattcga
gcagaacctttaaactcagttgtgcattga
DBGET
integrated database retrieval system
