Opisthocomus hoazin (hoatzin): 104337662
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Entry
104337662 CDS
T08436
Symbol
ZFR
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oha03041
]
104337662 (ZFR)
Spliceosome [BR:
oha03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104337662 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
104337662
NCBI-ProteinID:
XP_009941928
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
SQQPASGVAYSHPTTVASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAA
YGGYPTAHTATDYGYTQRQQEAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPT
ATAAAGAGGAPXFLAESYYQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSI
YPVSSTVQPVAAAATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQ
KQAAAAAAAAAATAAWTGTTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYK
EHLEGQKHKKKEAALKASQNTNNSSTSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQ
KVVKLHTKLGKPIPSTEPNVVTQATSSTSTSASKPTASASNIATSSSTVNSSVASSAVKI
LTPTASTPLNTASNNKTSSTAANIAVKKISTPKINFVGKYRSGNKLQTTGSKLEEMKSAE
SVKTTPAATVQTQEVKTDTAAEPVTPTTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCK
LCECSFNDPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEY
WRRREEEERWRMEMRRYEEDMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVXXX
XQPQGPAPLRRPDSSDDRYVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDNMTDHEK
SKNKEGDDKKDGSKDRALKGVLRVGVLAKGLLLRGDRNVNLVLLCAEKPSKTLLSRIAES
LPKQLAVISPEKYDIKCAVPEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMV
KDPPDVLDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAM
ELLVEKAISSATGPQSPGDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQR
EDITSSAQFALRLLAFRQIHKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKD
KKDYDNF
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
agccagcagccagcttcgggtgtagcctattcccatccaactacagttgctagctacact
gtccaccaggcaccagttgctgcgcacaccgttactgcagcctatgctccagcagcagct
acagttgcggtagcccggcctgctccagtggctgttgcagctgctgcaacagctgctgca
tacggaggttatccgacagcgcacacagctacagattatggttatacccagaggcaacaa
gaagctccgccgccaccacctcctgtcactacgcagaattaccaggattcctattcttat
gttcgatctactgccccagccgtagcttacgacagcaaacaatactatcaacaaccaaca
gcaactgcagcggctggggctgggggcgcccccntttttttagccgaatcgtactaccag
acagctccaaaagcaggatatagccaaggggcaacacagtatacccaggctcagcaaaca
cgacaagtgacagctataaaacctgcaaccccaagcccagcaacaactacattttctata
tatccagtatcctctactgtgcagccagtagcagctgcagctactgttgttccatcctat
actcaaagtgcaacgtacagtacaacagcagttacttactctggtacctcttattccggc
tatgaagccgcagtgtattcagctgcatcgtcctattaccagcagcagcagcagcaacag
aaacaggcagcggcagcagctgctgctgctgctgcaacagctgcttggacagggaccacc
tttactaaaaaggcaccattccaaaataagcaactgaaaccaaaacaacctcccaaaccg
ccccagatccactactgtgatgtttgtaagatcagctgtgctggaccacagacttataaa
gaacacttagaaggccagaaacacaaaaagaaagaagcagcattaaaagcttcccagaac
accaataacagcagcacttctgctcgtggaactcagaatcagttgcgctgtgagctttgt
gatgtgtcttgtacaggggcagatgcttatgctgcccatatccgtggagccaagcatcag
aaagtagtaaagttgcacacaaaactcggcaaacccattccttcaactgaaccaaatgtg
gttacccaagctacttcctcaacatccacatctgcttccaagccaactgcctctgcttca
aatatagcaactagcagcagtactgtgaactcctctgttgcatcctctgcagtgaaaatt
cttactcccacggcaagcacaccacttaacactgcgtccaacaacaaaacttcttcaacc
gctgctaatatagctgtaaagaaaatatctacaccgaaaataaactttgttggcaagtac
agaagtggcaataagcttcagacaacaggaagtaaattggaagaaatgaaatcagctgaa
agtgtcaaaacaactcctgctgctacagtacaaacacaggaagtaaaaacagacacagca
gctgaaccagtgactcccacaactcttgctgccttgcagagtgatgtccagccagtgggc
catgactatgtggaggaggtaagaaatgatgaaggaaaggtgatccgctttcactgtaaa
ctttgtgaatgcagttttaatgaccctaatgccaaggagatgcacttaaaagggaggcgg
cacagacttcagtataagaaaaaagtaaacccagacttgcaagtagaagtaaagcccagt
attcgagcaagaaaaattcaagaagagaagatgaggaaacagatgcagaaagaagagtac
tggagaaggcgagaagaggaggaacgctggaggatggaaatgaggcgatatgaagaggac
atgtactggaggagaatggaggaagaacagcatcactgggatgaccgtcgcagaatacca
gatggaggatatcctcatggtcctccaggaccgctaggcctgctgggagtnnnnnnnnnn
nctcagcctcaaggaccagctcctctacgccgtcctgactcctctgatgaccgctatgtg
atgaccaaacatgccgctatatatccaacagaggaggaacttcaggcagtccaaaaaatt
gtttctattactgagcgtgctttgaaacttgtttctgacaacatgaccgatcatgaaaaa
agcaagaacaaagagggagatgacaaaaaagatggcagtaaagacagagctttgaaagga
gttttacgggtaggcgttttggctaaaggtttgctactccgtggagaccgaaacgtcaat
cttgttttgttatgtgctgagaagccttcaaagactttactcagtcgtattgctgaaagt
cttcccaaacaacttgcagtaataagtcctgagaaatacgatatcaagtgtgcagtccca
gaggcagcaataattttaaattcatgtgtggagcccaaaatgcaagttactatcacactg
acatctccagtcattcgggaggagaacatgagggatggagatgtaacctcgggtatggtg
aaagacccaccggacgtcttggacaggcaaaaatgccttgacgctctggctgctctacgc
cacgctaagtggttccaggccagagctaatggtctgcagtcctgtgtgattatcatacgt
attcttcgtgacctctgtcagcgggttccaacttggtctgattttccaagctgggctatg
gagttgcttgtggaaaaagcaattagcagcgctactggtccgcagagtcctggggatgca
ctgagaagagtttttgagtgtatatcttcaggaatcattcttaaaggtggtcctggactt
ctggacccttgtgaaaaagatccttttgatacacttgcagtaatgacagatcagcaacga
gaggatattacttcgagtgcacagtttgcactgagactccttgcattccgtcaaatacac
aaagttttaggaatggatccgttaccgcagatgaatcaacgcttcaacatccataataat
cgtaaaaggagaagggacagtgatggggttgatggatttgaagcagagggaaaaaaagac
aaaaaagattatgataacttctaa
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