Opisthocomus hoazin (hoatzin): 104337995
Help
Entry
104337995 CDS
T08436
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04382
Cornified envelope formation
oha04510
Focal adhesion
oha04512
ECM-receptor interaction
oha04518
Integrin signaling
oha04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104337995 (COL4A3)
04518 Integrin signaling
104337995 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104337995 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104337995 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104337995 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oha04147
]
104337995 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
oha00536
]
104337995 (COL4A3)
Exosome [BR:
oha04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104337995 (COL4A3)
Glycosaminoglycan binding proteins [BR:
oha00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104337995 (COL4A3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104337995
NCBI-ProteinID:
XP_009942305
LinkDB
All DBs
Position
Unknown
AA seq
1688 aa
AA seq
DB search
MSFQKEINGEILAHHPHWLILSVPHLSAFKPFLVGLYCLTNSCVCKGKSPCFCNSMKGDK
GEKGFPGVPGPPGHRGFPGPEGPPGPQGPKGSPGLTGLVGPKGIRGAPGIPGFSGPPGLP
GEPGTVGPPGRSGVPGCNGTKGDQGFPGPPGRRGAPGVPGIAGLKGEKGAQGAQGYPGEL
GPQGPPGASGLPGKAGPPGPKGLMGLKVIGTKGRKGDTGLTGPPGPPGTVIVTLSGPDNM
TDLKGEKGEKGSRGLPGPVGFTGPVGDSQSEKGDRGEPGAQGKPGREGAPGPPGLPGRKG
EQGKSGLAGKQGAKVFIVCGFVGAFQDEDKTEYYDYVVGEKGDEGPPGPPGPKGQRGMPG
PQGPPGGAGRPGVSRPGLRGPPGFPGPKGTKGEKGQTGLCIVGPPGLPGITGRPGSVGLP
GPPGEPGRVTSRTGLPGLPGEPGCIGPPGPPGDIGMKGDEARVCTDCSYIPGIPGLPGSP
GPHGQDGVPGREGTTGPKGSPGSLGAPGFPGAQGLPGFRGDQGQKGSKGEPGYVYPEGPK
GERGDPGARGDKGRKGSSGFLGRPGSKGSKGSKGEEGLAGSKGNRGLPGLPGNVGLPGEM
GLPGLPGYGPQGIRGFKGSKGRSGSPGLPGEPGLKGETSKVTPLPALPGPQGPDGLPGPP
GVPGRVGARGQPGDSGHPGPTGDTGFPGLGFPGNPGPKGDKGLAGDRGPPGCAGKIGDPG
RAGNLGQPGEKGDPGMVIPGEPGRLGSPGIPGSKGETGFPGLPGLPGRAGHDGDDGLGGD
HGPAGVPGDPGFPGKPAECLTGLTGLQGGQGATGPPGGVQEEFHAHDDKIEMKVYFPDRC
IILCCHAFFLGGRGLQGSKGKLGPPGLSIPGIYGKPGDPGLIGLQGSTGLPGPKGQSGRP
GISGVPGSRGEPGIIGLLGIPGRPGTIGRPGNPGIRGSSGFPGLKGRKGFLGAKGEPGDK
GFPGPSETLVDIGTKGEQGLKGMQGRMGPRGEKGDVGVQGPPGLDGSEGMHGLPGVKGVM
GLPGIPGGQGFPGAPGNKGDMGIPGPKGQKGSPGFPGPSGDPGPPGYGGFPGDKGNPGYP
SAGPPGEPGPKGDQGPPGVLGSKGERGSQGHPGHKGVTGPQGIRGETGVTGIPGKLGPPG
DIGVKGQQGRPGQQGIAGPPGAVGDPGKNGLVGERGSQGQDGMPGRLGVKGEPGAPGRGI
PGLRGVPGRRGIKGDMGLPGVPGPPGAKGVRGDQGPIGPPGLVGLPGFQGSTGVAITGQK
GIRGIAGADGRPGPPGFPGTPGLPALSMKGSKGVRGADGIPGPTGPAGDIGPPGPKGIEG
RSGYPGARGDPGFIGFPGVKGEKGNQGPPGPQGAEGPRGPKGPPGVPGRIFSVPGSKGPP
GLPGIPGTPGDQGIQGIPGLQGPKGLKGLPGSFGHPGKPGLPGPKGDRGFPGQRGQPGLI
GFPGVQGLPGSPGTVIAGPTRRGFIFTRHSQSTKIPSCPHGTSQIYVGYSLLFVQGNERA
HGQDLGTAGSCLQRFTTMPFLFCDTNDVCSFASRNDYSYWLSAAAVMPVDMAPISGRALE
PHISRCAVCEGAAMVIAVHSQTTAVPACPEGWMSLWKGFSFVMYTSAGSEASGQALASPG
SCLEEFRAIPFIECHGRGTCNYYTNSYSFWLASLNPRRMFRKPLPQTLKAGELENIISRC
QVCMKRPV
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccaaaaagagatcaatggagaaatattggctcatcaccctcactggctcatt
ttgtctgttcctcatctttctgcctttaaaccattcctagtaggactgtattgcctcaca
aatagctgtgtatgcaaaggtaaaagtccctgcttttgcaatagcatgaaaggtgataag
ggtgaaaaaggctttcctggtgttccaggtccacctggtcatagaggctttcctggtcca
gaagggcctccagggccacagggaccaaagggttctccagggcttacgggcttagttgga
cccaaaggtatacgaggagccccaggaatacctggattttcaggtcccccaggccttcca
ggtgaaccgggaactgttggtcctcctgggcggtctggtgttccaggttgcaatggcaca
aagggtgatcaaggttttccaggtcctccaggtagaagaggtgctccaggtgttccaggt
attgctggcctcaaaggagagaagggtgctcagggtgctcaaggatatcctggggaactt
ggaccacagggccctccaggagcttcaggcctgccagggaaggcaggacctcctggacct
aagggtcttatgggactaaaagtaataggaaccaaaggaagaaagggtgacactggctta
actggaccccctggaccaccagggaccgttattgtgacattaagtggaccagacaacatg
acagacttgaaaggagagaaaggagaaaaaggatcaagaggacttccagggccagtgggg
tttacagggccagttggtgattctcaaagtgaaaagggtgaccgaggagaacctggagca
cagggtaaacctggaagagaaggtgccccaggaccacctggcttaccgggacgaaagggt
gagcagggcaaatctggactggctggcaagcaaggagctaaggtatttattgtctgtggt
tttgttggtgcttttcaggatgaggataagacagagtattatgattatgtggttggtgaa
aaaggagatgaaggaccccctggacctccaggaccaaaaggtcaacgtggcatgcctggg
ccacagggtcctcctggaggtgctggtagaccaggtgtgtcaagacctggtctgagaggt
cccccagggtttcctgggccaaaaggaacaaaaggagagaaaggacaaactggcttgtgt
attgtaggccctccaggactacctggtattactggcagaccaggttctgttggattacca
ggtcctccaggagaaccaggtagagtaacatctagaacaggcctaccaggacttcctgga
gaaccagggtgtataggacctccgggacctccaggagatattggcatgaaaggtgatgaa
gctcgcgtgtgtactgattgcagctatattccgggaatacctggtcttcctggttctcct
gggccacatggccaagatggtgtgcctggtagagaaggaactacaggtccaaaaggttct
ccaggttctctgggagcaccagggtttccaggagctcaaggacttccaggttttagagga
gatcaaggacaaaaaggatcaaaaggtgagccaggatatgtgtatccagaagggccaaaa
ggtgagcgaggagatccaggggctaggggagacaaaggaagaaaaggttcaagtggattt
ctgggaagacctggctctaaaggatccaagggttctaaaggtgaagagggattggctggt
tcgaaaggaaatagaggactacctggattgcctggcaatgttggtcttcctggagagatg
gggcttcctggactgccaggatatggaccacaaggaataagaggtttcaaaggctctaaa
ggaagatctggttcacctggattacctggagaacctggtctgaaaggagagaccagtaag
gtaactccattacctgccttgccgggacctcaaggaccagatggtttacctggaccccca
ggagtgcctggtagggttggagcaagaggtcagccaggtgattcaggacatccagggcca
acaggtgacacaggctttcctgggcttggatttcctggaaacccaggtccaaaaggagat
aaaggacttgcaggagacagagggccgccaggttgtgcaggaaagatcggagatccaggc
cgagctggaaacctaggacaaccaggagaaaagggtgacccaggcatggttattcctgga
gagccaggtagacttggttcaccaggcattcctggctcaaaaggtgaaactggatttcca
ggacttccaggcctaccagggcgtgctggacatgatggtgatgatggcctaggaggagat
catggcccagctggagttcctggagatccaggttttccggggaaacctgctgaatgtctt
actggcctgacaggtttgcaaggtggccagggagctacaggcccaccaggtggagttcaa
gaagagtttcatgctcatgatgacaagatagagatgaaggtttattttccagacagatgt
atcatcctatgctgtcatgcatttttcttaggaggaagaggtttgcaaggttcaaaagga
aaactaggtcctcctggcttgagtatcccgggaatctatggaaaacctggagaccctgga
ttaataggtcttcagggaagtacaggattacctggtcccaagggacagtctggaaggcca
ggaatctctggtgtgccgggttcaaggggagagccaggtataataggcctgttaggaatt
cctggacgccctggcacaattggaagaccaggcaacccgggtatcagaggttcttctggc
ttcccaggactaaagggaagaaaagggtttcttggagcgaaaggcgaaccaggtgataaa
ggttttcctggaccatctgagaccttggttgatattgggactaaaggagaacaaggctta
aaaggaatgcaaggaagaatgggtccaagaggagaaaaaggagatgtcggtgtacaaggt
cccccaggtcttgatggatccgaaggaatgcatggtctaccaggtgtcaaaggagtaatg
ggtcttccagggattcctggaggacaaggattcccaggtgcaccaggaaacaaaggggac
atgggaattccaggtccaaaaggacagaaaggatctccaggctttccaggaccatcaggt
gaccctggtccaccgggctatggtggctttccaggtgacaaaggaaatcctgggtaccca
tctgctgggcctccaggagaacctggtccaaagggagatcaaggccccccaggagttctg
ggcagcaaaggagaaagaggatcccaaggtcatccaggacataaaggagtaacaggacca
caggggatcagaggggaaactggagttacagggatcccagggaagcttggacctcctgga
gatattggtgttaaaggacagcagggccgcccaggacaacagggcattgcaggccctcca
ggtgctgttggagaccctggaaaaaatggactggttggtgaaagaggtagtcaaggtcaa
gatggtatgcctggtcgcctgggagtaaagggagaaccaggagcaccagggagaggaatc
cctggcctgcgaggtgttcctggtcgtagaggaattaaaggggacatgggactgcctggt
gttcctgggccaccaggtgcaaaaggtgttcggggtgatcaaggacccattggacctcct
ggcttagtggggttgcctggatttcaaggctcaacaggcgtggcaattactggccaaaaa
gggatcagaggtatcgctggtgcagatggaagaccaggtccccctggttttccagggact
cctggtcttcccgctctcagcatgaaaggaagcaaaggtgttagaggggcagatggcata
ccagggccaacaggcccagctggcgacattggtccgcccggtccaaaaggaatagaaggc
cgatcaggttatcctggtgctagaggagaccctggatttattggattcccaggtgtaaaa
ggagaaaagggtaatcaaggaccccctggaccacaaggtgcagaagggccaaggggacca
aagggtccacctggagtccctgggagaatattctctgtcccgggaagcaagggtcctcct
gggctgccaggaatcccaggaacaccaggtgatcaaggaattcaagggattcctggacta
caaggacctaaaggactaaaaggtttaccaggaagttttggtcatccaggtaaaccagga
ctgcctggtccaaagggagacaggggatttccaggacaaagaggacaacctggactgatt
ggcttcccaggtgtacaggggttacctggatcaccaggcactgtcattgctggtccaaca
agaagaggttttatctttacccggcatagtcagtcaacaaagattccttcatgcccacat
gggacatcacagatctacgttggctattcactgctttttgtacaaggaaatgaacgagca
catggacaagatcttggaacagctggtagctgcttgcagagatttaccaccatgccattc
ttattctgtgacaccaatgatgtttgtagttttgcttctcgcaatgactattcatactgg
ctgtccgctgcagcagtaatgccagtggacatggcaccaatttctggcagggcactagag
ccccatataagcaggtgtgctgtctgtgaaggagctgcaatggtaatagcagttcacagc
caaacaactgcagttcctgcatgtccagaaggctggatgtctctctggaagggtttttct
tttgttatgtatacaagtgccggctcagaagcttctggccaagcattggcatctcctggc
tcttgtttggaagagtttcgagccatcccattcatcgagtgccatggcagggggacgtgc
aactactacacaaactcctacagcttctggttggcatcgttaaatccaagaagaatgttc
aggaaacctctgccacagactttgaaagcaggagaactagaaaatatcatcagccgttgt
caggtctgcatgaagagaccagtctaa
DBGET
integrated database retrieval system