Opisthocomus hoazin (hoatzin): 104337996
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Entry
104337996 CDS
T08436
Symbol
COL4A4
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04382
Cornified envelope formation
oha04510
Focal adhesion
oha04512
ECM-receptor interaction
oha04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104337996 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104337996 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104337996 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104337996 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oha04147
]
104337996 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
oha00536
]
104337996 (COL4A4)
Exosome [BR:
oha04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104337996 (COL4A4)
Glycosaminoglycan binding proteins [BR:
oha00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104337996 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104337996
NCBI-ProteinID:
XP_009942306
LinkDB
All DBs
Position
Unknown
AA seq
1774 aa
AA seq
DB search
MSEQSEYLFAFPDPENIRMVSYDFKIPICIKNAAPKTERQQTMLLRAAETLRAALTHLPS
QLTALLPVGNVQSQCYSQPEEQGTAGTAKRSSRIYRPNGDARSSLNLTDRHASWWLLIVF
SAQEIDGGGYAYIDPCGGQDCSVCRCFAEKGSRGQPGELGAQGPIGSLGSTGPAGLPGEK
GRRGENGQPGPAGEKGDKGPTGVPGFPGLDGVPGLPGSEGPRGKRGLDGCNGSRGDPGFP
GENGYMGPRGPYGNPGQKGEKGNSVYVSHFGKGPPGDRGDPGPPGMPGPRGTRGTTGPSG
YPGQPGLPGIPGYPGLPGEQGNPGIGVDGQKGEPGDVGLPGPPGSPLLVGPPGAQLFKGE
KGQKGLPGVTGYRGPRGPKGILGRGEKGEKGIKNGFPGLQGNPGSYGPAGFPGMKGETGF
AGFPGQRGYPGIKGDPGEKGPPGPPGAVGTLLLPIKGPQGDPGFPGPTGDLGSVGPIGPA
GLLGRPGDDGTSLPGMPGVSGAPGPQGFQGDPGFPGTGESVPGRPGLPGPPGLPGQPGRQ
GLPGLPSIICTDRGIPGEPGAKGQIGLPGRKGEKGEKGNQGLCSCTAGPPGPRGIQGPPG
TQGKKGQMGYPGRRGEKGDPGLSGAMGSPGLPGTPGSAGQHGEKGEKGDPGRVRIKGIKG
ERGPVGVPGFPGQIGNDGKDGEPGLPGEKGADGNYGAALPGDKGFPGVPGLPGVQGQMGL
PGLGFPGPPGVRGSPGDFGDTGSVGPPGPKGQKGETVCITLPYPGNPGPPGFKGVQGPKG
LKGLPGRPGPNGFDGQKGDPGRPGAGIPGPEGFRGEAGDPGEEGERGSSVDGKNGPPGPP
GIDGQKGVLGDTTYGPPGIPGNRGLPGPPGAQGARGDPGIPGLRGQPGTPGFPGAKGFRG
PEGEIGAPGCPGFPGPPCDTGLPGPPGLRGVIGLPGPQGLPGFKGQRGDRGQPGPPGIKG
LKGSPGSQGPPGPPGSRGLPGLPGNKGPPGFPGQTGSKGIQGPQGFPGLPGTQGPVGISG
VKGEEGEMGPSGPSGECGDMGIKGERGLPGDSGCINIRFEKGRKGERGFPGENGFRGERG
EKGNTGIRGTPGFPGENGVPGLPGDRGDTGLTGFPGSPGFPGPKGFKGITGFQGQPGDQG
DIGLPGIPGNPGLTGPKGSKGKRGDPSPLLGTRGRKGPPGDPGLPGLCGFPGEKGSPGIQ
GQPGRPGSKGEPGYPGIPGFPGSTGPQGLPGQPGERGQHGILGPPGLQGLAGFQGRKGLP
GPPGLDGLDGLKGQKGSAGAPGQSETGPPGYVGELGPKGDRGEPGWPGISIPGPPGERGF
PGFPGRRGPVGATGPMGRSPDSASPGPPGDQGPPGLDGIRGQPGNPGPPGETVFVRGDPG
GIGIRGAPGNPGQRGQQGARGLPGNPGRGGPKGPMGIHGPQGPPGATGQPGDQGFQGKPG
PTGPTGDPGEPGKTDDSCPAIPGPPGEAGQRGLDGPVGLPGLIGQPGPQGRKGEEGSCGL
PGQDGSPGASGPVGDQGHMGEPGYAGPQGPPGQTGIPGPPGPHIRSASGFLLVLHSQSDR
EPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGLAGSCLPVFNTMPFAYCNINQVCYYASR
NDKSYWLSSAAPLPMTPLSEEEIRPYISKCAVCEAPAPAVAVHSQDQSIPPCPANWRSLW
IGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSAPFIECQGQRGTCQFFANEYSFWLTTVM
PELQFVAAPLSGTLKEGQEQRKKISRCQVCLKHG
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacagtcagagtatttgtttgcttttccagatccagaaaatatcagaatggtt
agctatgatttcaaaatacctatctgtattaaaaatgctgcacccaagacagagaggcag
caaactatgctgctgcgggcagcagaaacgttgcgagctgccctgacccatttaccctca
cagctgactgctcttctcccagtcgggaacgttcaatctcagtgctacagccagccagag
gagcaaggaacggcagggactgcaaaacgatccagcagaatttaccgaccaaacggtgac
gcgcgttcctcactaaacctgacagaccgtcacgcgagctggtggctgctgattgttttt
tcagcacaagaaattgatgggggaggatatgcatatattgacccatgtggtggacaggat
tgttcagtttgccggtgctttgcagaaaaaggatcaagaggtcagcctggtgagctggga
gctcaaggtcccattgggtccttgggatctacaggaccagctggtctgccaggggaaaaa
ggaagaagaggtgagaatgggcagcctgggccagctggagaaaaaggtgataagggccca
actggagtcccaggatttcctggtttagatggtgttcctggattaccaggaagtgaagga
cccaggggcaaacgtggtttagatggctgcaatggctcgagaggagatccaggatttcca
ggcgaaaatggttatatgggaccaagaggtccttatggaaatccagggcaaaaaggagaa
aaaggaaattcagtgtatgtttcacattttggaaaaggacctccaggagacagaggtgat
cctggaccccccggcatgcctggacctagagggacaagaggtacaacgggcccatctgga
tacccaggccaaccaggcttgcctggtattccaggctaccctggtttgccaggtgaacag
ggaaatccaggtattggagtggatggacaaaagggggagccgggggacgttggacttcct
gggccacctgggtcacccctgttagttggacctcctggagctcagctgttcaaaggagaa
aagggccaaaaaggattacctggggtaacaggatacagagggccacgtggacccaaaggt
atacttgggagaggagaaaagggagaaaaaggcataaaaaatggattccccggattgcag
ggtaatcctggttcttacggacctgcaggttttcctggaatgaagggggaaacaggattt
gctggttttcctggacaacgtggctatccaggcataaagggggatccaggagaaaaaggg
cccccaggtcctcctggagctgttggaactctgctgcttcctataaaaggtccacaagga
gatcctggatttccgggtcctactggtgatctggggtcagttggaccaattggtcctgca
ggcctgctaggaagaccaggagatgatggaacaagtctgcctggcatgccaggagtaagt
ggggcaccaggacctcaaggttttcaaggtgaccctggtttccctggaacaggtgaatca
gtcccaggaagacctggacttcctggaccaccaggcctaccaggacagccaggaagacaa
ggcttacctggactacccagtataatctgtactgacagagggatccctggagaacctgga
gcaaaaggccagataggccttccaggaagaaaaggtgaaaaaggagaaaagggaaatcaa
ggcctctgctcatgtactgctggtcctcccggtccccgtggtatacaaggacctccaggt
actcaaggaaagaaaggacaaatgggataccctggaagacgtggagaaaagggcgatcca
ggcttatctggtgcaatgggctcaccagggctccctggaacacctggttcagctggacaa
catggtgaaaaaggagagaagggtgatccaggaagagttagaattaaaggaataaaaggt
gaaagaggtcctgttggggttccaggatttccaggccaaataggtaatgatggcaaagat
ggggaaccaggattgcctggggaaaaaggagctgacggcaattatggagcagcactacca
ggtgataaaggattccctggggtcccaggacttcctggggtacaagggcagatgggattg
cctggtttggggtttcctggccctccaggagtcagaggtagccctggagactttggtgat
actggtagtgttgggccacctggtccaaagggtcagaaaggtgagactgtctgcattaca
ttaccataccctggaaatccaggtccccctggttttaaaggtgttcaaggaccaaagggt
ttaaaaggactccctggtcgtcctggaccaaatggctttgatgggcaaaaaggtgatcca
ggcaggccaggagcaggaatccctgggccagaaggctttcgaggcgaagctggtgatcct
ggtgaggaaggtgaaagaggatcttcagttgacggtaaaaacggccctccaggtccacct
ggcatagatggtcagaaaggtgttctgggtgataccacgtatggtcctccaggaatccca
ggcaacagggggctgccaggaccccctggagcacaaggagcaaggggcgatcccggcata
cctgggcttcgagggcagcctggtaccccaggatttccaggtgccaaaggttttagaggc
ccagaaggtgagataggagcaccaggctgtccaggctttcctggtccaccatgtgacaca
ggcttaccagggccaccaggactcagaggtgtcataggcctgccaggacctcaaggctta
ccaggctttaaaggtcagaggggagacagaggccaacctgggccacctggaatcaaaggt
ctcaaaggctctcctggctcacaaggtccgccaggtcctccaggctcccgaggacttcca
ggacttccaggcaacaaaggaccacctggtttcccaggacaaacaggaagcaaagggatt
caaggaccccaaggattcccaggactcccaggaacacaaggcccagtgggaatctctggt
gtaaaaggtgaagaaggagaaatgggtccatctgggcctagtggagaatgtggggatatg
ggaataaaaggtgaaagagggcttccaggagacagtggctgcattaacatccgttttgag
aaaggacgaaagggggaacgaggatttcctggtgagaatggatttagaggtgaaagaggt
gaaaaaggcaatactggtatcagaggcactccaggatttccaggggagaacggtgtcccg
ggactgccaggtgaccgtggtgacactggactgactggctttccaggatcaccgggtttc
ccaggaccaaagggctttaaaggaattacgggttttcaaggacaaccaggtgaccagggt
gacattggcttaccgggaatccctggaaatccaggactgaccggcccaaaaggatctaaa
ggcaagagaggtgacccgtctcctctgcttggtacacgcggtcgaaaagggcctcctgga
gatccgggattgccaggactctgcggattcccaggagagaagggttcaccaggtatccaa
gggcaacctggaagaccaggatccaagggtgaacctggatacccaggaatacctggattt
ccagggagtacaggtcctcagggattgccaggacaacctggagaaagagggcaacatgga
attttgggacctccaggattgcaaggattagctggattccaaggcagaaaaggtcttcct
ggaccacccggactggatggcttggatggactaaaaggtcaaaagggttctgcaggagct
ccaggtcaaagtgaaacagggcctccaggatacgtgggagaacttggaccaaaaggagac
agaggtgaacctggatggcctggtatttctattccaggcccccctggagaaaggggattc
ccaggatttccaggtagaagaggacctgttggagccactggacctatgggacgatctcct
gatagtgcttctcctggtcctccaggtgatcaaggaccacctggtttagacggcatcaga
gggcagcctgggaatcctggtcctcctggagagactgtctttgtgcgaggagatccaggt
ggtattggcattcgaggggcaccaggtaatcctgggcagcgagggcaacaaggagccaga
ggtcttccagggaacccaggaagaggaggcccaaagggtcctatgggaatccatggccca
cagggtccacctggtgctacaggacaaccaggagaccaaggctttcaaggaaaacctggt
cccacaggtcccacaggtgaccctggtgaaccaggaaaaacagatgattcatgccctgca
atcccagggcctccaggggaagcagggcaaagaggacttgatggccctgtaggattacca
gggctgataggccagcctggaccccaaggaagaaaaggtgaagaagggtcatgtggcctg
ccaggtcaggatggctcacctggggcatctggaccagtaggtgaccaagggcatatggga
gagccaggatacgctgggccacaaggtccacctggccagacgggtatcccaggaccacca
ggcccccatattagatctgcgagtgggttcttgcttgtccttcacagtcagtcagacaga
gaaccgctctgtccacaggggatgccaaaattatggactggctatagtctgctctacctg
gaaggacaagagaaagctcataatcaagatcttggtctggcaggatcttgtcttcctgtg
tttaataccatgccctttgcttactgtaacatcaaccaagtttgttactacgccagtcga
aatgataagtcttactggctgtcaagtgctgctcctttaccaatgacgcccctctccgaa
gaagaaatccggccctacatcagcaagtgtgctgtgtgcgaggccccagcccccgcggtc
gcagttcacagccaagatcagtcgattcctccctgcccagcaaactggagaagcctttgg
ataggatattcttttctgatgcacaccgggtctggcgatcagggtggtgggcagtccctt
atgtcccctggaagttgcctagaagacttcagatcagcaccgttcattgaatgccagggt
cagcggggaacgtgtcaattttttgctaacgaatacagtttctggctaacaactgtgatg
cccgaattgcagtttgtagcagcccccctgtcaggaactcttaaagaaggacaagagcag
aggaaaaaaatcagtaggtgccaggtgtgcctgaagcatggctaa
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integrated database retrieval system
