Opisthocomus hoazin (hoatzin): 104338276
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Entry
104338276 CDS
T08436
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner
KO
K27412
PCNA-interacting partner
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oha03400
]
104338276 (PARPBP)
DNA repair and recombination proteins [BR:
oha03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104338276 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
104338276 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD_C
Motif
Other DBs
NCBI-GeneID:
104338276
NCBI-ProteinID:
XP_009942605
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MIAFRQKLLNLIKSFRRQWPLFSNSERTTVCGADCMLMALQLSMAEVNKQHYGDFTVSLS
DVLETWKYLLHDKLGLSYENMKEPENYLDIKKAYHAFLARSNMLDLIDIYQKCYDLGLVS
EDESIAPVQLLEFFSDIMNVQANNGSVLSTPSTPVKRQGQENVKVKILAKKCVCSYLSLL
VNSKDDLALAHILNVPDRGLGREAFTNLKHASQKRKMSTFLMATSFIRTVELGGRGCASS
LFDPLRIHVKGLSDFVNFVDKLQEIVGEILNPRIAGGRIMSTVKMHLIKGRSNGDPFCQA
VEEVVQDLDLKIKNIVDSQHEVLTDSTTGVSPARPKLHSINRGTAYCGRDTVKVLLVLLD
DEAVNPPTQNKAELLYDDESLNLFGITSVMTLFRSPAQSNGSSPKPLRQRIQKSMDEKKM
KVKQSSIKSQFACTYKNDLSEIKSQHFLSSNQIPTCLHPAPKQCLKDRYLTEGMNSCLDV
PVLGTISENVHHTRSYTEMGELSCQPRNKNSENEQMDLNNDKVICDKESEPSLQKNAKRP
KTSNNPQKELDSKIDGKRKHSKTASKKKLIAGQAKLTHFFKL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgattgctttccggcaaaaactgttaaacttgatcaagagtttcagaagacaatggcct
ttgttttcaaactctgagaggactactgtatgtggagcagactgcatgctgatggcatta
cagttgtcaatggctgaagtcaataaacagcactatggagatttcacagtgtcgcttagt
gatgtgttggaaacttggaaatatttgttacatgacaaactgggattatcatatgaaaac
atgaaagaacctgaaaattatctggacataaaaaaagcctatcatgccttcttagcaaga
agcaatatgttagatctaatagacatatatcagaagtgctatgatcttggactagtatct
gaagatgaaagcatagcccctgttcaactattggaatttttttctgacataatgaatgta
caagcaaataatggttctgttctttctactccttctaccccagtcaagaggcagggccag
gagaatgtgaaggtgaaaatcctggcaaagaagtgtgtttgttcctacttaagcctgttg
gtgaattctaaggatgatctggcattggctcatattctaaatgttcctgacagaggactt
ggtagagaagccttcactaacctaaaacatgcctcacagaagagaaaaatgtccacattc
ctgatggcaacatcttttatccgaactgtagaacttggaggaagaggctgtgcatcttcc
ttattcgatcctttaagaatccatgtaaaggggctttcggactttgtaaattttgttgac
aaactgcaagaaattgttggtgaaatcttaaatccaagaattgcaggggggcgaattatg
tcaacagtgaagatgcatttgataaaaggccgaagcaatggggatcctttctgtcaggca
gtagaggaagttgtacaagatttggatttgaagattaaaaatattgtcgattcacaacat
gaagtcttgactgacagcactactggagtgagtccagcacggccaaaattgcattccata
aatcgtggcactgcgtattgtggcagagatactgtaaaggtcttactagttcttctggat
gacgaagctgtcaatcctcctactcagaacaaagcagaactattatatgacgatgaaagc
ttaaatttgtttggaatcacctctgttatgactctcttcagatctccagcacaatccaat
ggatcttctccaaaacctcttagacaacgtattcagaaatctatggatgagaagaaaatg
aaggtgaagcaatcttcaatcaaatctcagtttgcgtgtacatataaaaatgatttgagt
gaaataaaaagtcagcatttcctcagcagtaaccaaattccaacctgcctacatcctgca
ccaaagcaatgtctaaaagatagatatctcacagaaggcatgaattcatgtcttgatgta
ccagtgcttggaactatttctgaaaatgttcaccacactagaagttatacagaaatggga
gagctgagttgtcagccaagaaacaagaactccgagaatgaacagatggatttgaataat
gacaaagtaatctgtgataaggaaagtgaaccatctttgcaaaaaaatgccaaaagacct
aagacttcaaacaaccctcagaaggaattggacagcaaaatcgatggaaaaagaaaacac
agcaaaactgcaagcaagaaaaagttgattgctggtcaggcaaaattaactcactttttt
aaactataa
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