Opisthocomus hoazin (hoatzin): 104338338
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Entry
104338338 CDS
T08436
Symbol
PCDH1
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104338338 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oha01009
]
104338338 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oha04515
]
104338338 (PCDH1)
Protein phosphatases and associated proteins [BR:
oha01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104338338 (PCDH1)
Cell adhesion molecules [BR:
oha04515
]
Cadherins
Protocadherins
104338338 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
Cadherin_4
MLANA
TMEM154
Mid2
Syndecan
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
104338338
NCBI-ProteinID:
XP_009942673
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MRCSHSIPLTLRIRLKPPGPFPRKPAALHYARFSWMLFPRRLCSSDKAPPAPRSSCLCVT
PEHPGTGYLLCRASQRLQQHLQASLQRRMKPLASCLGLWLFLQLPALVSGTRVVYKVQEE
QPPNTLIGSLASDYGFPDVGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLL
PGDPCFLEFEVSITDLILNSSPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNIGALF
PIPLAMDRDSGPNGVASYELTAGPEAQELFGLQQAGKQPQLIVMGNLDREQWDSYDLTIK
VQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGA
NAEIDYSFHQASDMVRRLLRLDRTTGLITVQGPIDREDVNTLKFSVMAKDKGANPKSART
QVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVT
CVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKDYTIEIVAVDSGTPPLSSTNS
LKVQVVDVNDNAPVFSQSFTEVAFPENNEPDDLVMEVSASDADSGSNAKLVYSLVTDPSS
KGSFTIDPDSGEIRVKAMLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPK
FMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSI
SFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTS
PGQQVSKVKAEDIDSGVNAELTYSITGGNPFELFQISPHSGDITLEKEILRKHHGLHRLV
VRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRS
NILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYTPKQVSKSSKSKSK
VKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSN
SPLPSIQLKAQPPSDLSGSLGSCHGAELNCPVGFDFNKVFYF
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgctcccacagcatcccgcttacgctccggatccggctgaaaccgcccggcccc
ttcccccgcaaacctgcagcccttcattacgcgagatttagctggatgctcttccctcgc
aggctttgttcttctgacaaggccccaccggcaccacgaagcagctgtctctgcgtgacg
ccagagcatcccggcaccgggtacctgctgtgccgggcaagccagcgcctccagcagcac
ctccaggcttccctgcagcgcaggatgaagccgctggcatcctgcctgggcctgtggctc
ttcctccagctccctgccctggtctctgggacccgtgtggtgtacaaagtgcaggaggaa
caaccccccaacaccctcatagggagcctggcctctgactacggattcccagacgtgggg
cacctctacaagctggaagtgggggccccgtacctacgtgtggacggcaagactggggac
atctacaccacagagacctccatcgaccgggagagcttgcgtgaatgccagcacctcctg
cccggagacccctgcttcctggagttcgaagtgtccatcactgacttgatcttgaacagc
agcccacgcctgctcgaggggcagatagaggtgctcgatatcaatgacaacacccccaac
tttgcctcgcccgttctcaccctctccatccctgaaaacaccaacatcggggcactcttc
cccatccccctggccatggaccgggactcgggccccaacggtgttgcctcctacgagctg
acggctggtccggaagcgcaggagctctttgggctgcaacaggctgggaagcagccgcag
ctgatcgtcatggggaacctggaccgggagcagtgggactcctatgatctgaccatcaag
gtgcaagatggaggcaaccctccgcgggcaagcagcgccctgcttcgcatcactatcctg
gacatgaatgacaacgcgcccaagttcgagaaggccctgtacgaggcggagctctccgaa
aacagccctgtgggacactctgtcctccaggtgaaagccaacgactcggaccagggcgcc
aacgctgaaatcgactactccttccaccaagcctcggacatggtgcgccggctgctgcgc
ctggatcgcaccacagggctcatcactgtgcaggggcccatagaccgcgaggatgtcaac
accctcaagttctccgtcatggccaaggacaagggagccaaccccaagagtgcccgcacc
caggtggtggtcaccatcaaggacatgaatgacaatgcgccctccatagagatacggggc
attgggcttgtgacccaccaggatggcatggcaaacatctcggaggatgtgccagtagag
acagcagtagctttggtgcaggtgtccgaccgagatgagggcgaaaacgctgtggtgacc
tgcgtggtggctggtgacgtcccattccagctgcggcaggctagtgaaaccgggagcgac
agcaagaagaaatacttcctgcagaccaccacgccgctggactatgagtcggtgaaggat
tacacaattgagattgtggcggtggactcagggaccccgcccctctccagcaccaactct
ttgaaggtgcaggtggtggacgtgaatgacaatgcaccagtcttcagccagagcttcact
gaggtggcgttccctgagaacaacgagcccgacgacctggtgatggaggtgagcgccagc
gatgctgacagtggctccaatgccaagctggtttactccctggtgacagacccctcctcc
aagggctccttcaccattgaccccgactccggggagatccgggtgaaggcgatgctggac
cgagagcagcgggagcgctatgagttcttggtggtggcggcagacaagggcagccccagc
ctcaagggcacggcgtctgtggccatcaatgtcatggacaggaatgacaatgaccccaag
ttcatgctgagcggctacaacttctcagtgatggagaacatgccacccctcagccctgtg
ggcatggtgacggtgatcgatgctgacaaaggagaaaatgcccgcatccagctgtcggtg
gagcaagacaatggggattttgtcatccagaatggcactggcaccatcctctccagcatc
tcttttgaccgggaacagcagagcacgtacactttccgactcaaggcggtggatggtggg
gatcctcccaggtctgcctatgtgggggtgaccatcaatgtcttggatgagaacgataac
gcccccttcatcacttcaccctccaatgccacctacaaacacatcctgccccacaccagc
cctggccagcaggtaagcaaggttaaagcagaggacattgactctggcgtcaacgcggag
ctgacgtacagcatcacaggaggcaaccccttcgagctcttccagatctccccgcacagt
ggagacatcaccctggagaaggagatcctgcgcaagcaccatggcctgcaccgcttggta
gtgcgtgtcaatgacaagggcaagccctcgcggcatggcacagcgctggtacacttctac
gtcaatgagacgctggccaaccgcacactgctggacacactggtggggcacagcctggac
acaccgctcgacattgacatcgccggagaccccgaatatgagcgcagcaagcagcgaagc
aacatcctttttggagtcatcgctggcatcgtagccgtcaccctggtcatcgtgctggtc
gtcctggtgcgctactgccggcagcgggaggccaagagcggctaccaggcaggcaagaag
gagaccaaggacctgtacacacccaagcaggtcagcaagagcagtaagagcaagagcaag
gtgaagaagagcaagtccccaaaaccgcccaagcccacggaggatgaggaggagacaggg
ctgcagaaatcactcaagttcaacctcatgaatgactctgtcagcgacagcccccgaatt
cacctgcccctcaactacccgccgggcagcccggacctgggtcgccactaccgctccaac
tcgccgctgccctccatacagctgaaggcccagccgccctccgacttgagcggcagcctg
ggctcctgccatggggctgagctcaactgccctgttggatttgacttcaataaagttttc
tatttttga
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