Opisthocomus hoazin (hoatzin): 104338406
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Entry
104338406 CDS
T08436
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oha03009
]
104338406
03036 Chromosome and associated proteins [BR:
oha03036
]
104338406
Enzymes [BR:
oha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104338406
Ribosome biogenesis [BR:
oha03009
]
Eukaryotic type
Pre-60S particles
Helicases
104338406
Chromosome and associated proteins [BR:
oha03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104338406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
104338406
NCBI-ProteinID:
XP_009942747
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MRDEIAVVVILNKLLQELTEEVKEGDFSNFPLSENTINLLKARGVKYLFPVQVKTFQPIY
DGKDLIAQARTGTGKTFSFAVPLIEKLQSVLQDGRRGRAPKVLVLVPTRELATQVARDFK
NLTRKLSVACFYGGTPYQAQLDLLRSGIDILVGTPGRIKDHIQNSKLELSSVKHVVLDEV
DHMLDMGFAEQVEEILGFAYKKGSENNPQTLLFSATCPRWVYDVAKKYMKDEYEQIDLIG
KKTQRTATTVEHLAIQCRSSQRAGVLGDIIQVYSGSHGRTIVFCETKKEANELAMNASLK
QDAQSLHGDIPQKQREITLKGFRNGVFEVLIATNVAARGLDIPEVDLVIQCSPPKDVDSY
IHRSGRTGRAGRTGICICLFQRREEDLLKQVEHKAGITFKRVGVPSATDVIKASSNNAKK
LLEAIPSSAVDYFRKSAQELIDEKGAVAALAAALAHISGASYIQQRSLLNSTVGFVTMVL
KCSIEMRTMSYAWRGLKEQLGEEVDAKVSAMRFLKGKTGVCFDIPVGELSNIQEQWTDTR
RWQLSMAKELPELEEYPQEAGRGFSRFGSGRQGDGGFKRNNWVKNGNRGRDFNRSLD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcgggatgaaatcgcagtagtcgtgattttgaacaagttattgcaggagctgacagaa
gaagtgaaagaaggtgacttctccaattttccgctctctgaaaacaccatcaaccttctc
aaagctcgaggtgtaaaatacctgttccctgtgcaagtgaagacttttcagcccatatat
gatggcaaagacctaattgctcaagctcgaacaggaactgggaaaactttttcttttgct
gttccgctgattgaaaaacttcagagtgtcttgcaggatgggagaagaggccgtgcacca
aaagtgctggttcttgtcccaaccagggaactggccactcaggtagccagagacttcaag
aatctcaccaggaagctgtcggtggcttgtttttatggaggaactccatatcaagcacag
cttgatctccttagaagtggcattgatattctagtgggaactcctggacggatcaaagac
cacattcagaatagcaagctggaactttccagcgtgaagcatgttgttttggatgaagtt
gatcacatgttagacatgggctttgctgaacaagtggaagaaatcttaggatttgcttat
aaaaaaggttctgagaacaacccccagacactgctgttttctgcaacttgtccgcgatgg
gtatatgatgtggcaaaaaaatacatgaaagatgagtatgaacagattgacctaattgga
aagaagactcaaaggactgccacgactgtggaacacttggctatacagtgtcgctcatct
cagagagcaggagttcttggagatatcattcaagtctacagtggcagccatgggcggacc
attgtcttttgtgagaccaaaaaggaagcaaatgaactggctatgaatgcttcgctcaaa
caggatgcccagtcattgcatggtgacattccacagaaacagagagaaattacattaaaa
ggctttagaaatggtgtgtttgaagttctgattgcaacaaatgtagctgcccgtggtttg
gatatacctgaggttgaccttgttatacagtgttcaccaccaaaagatgttgattcctac
atccatcgttctggacgtacgggtcgagctggccggaccgggatctgcatttgtttattt
cagagaagagaagaagatcttctgaaacaagttgagcacaaagcggggattacatttaag
cgtgtaggtgttccgtctgctacagatgtaattaaagcttcaagtaataatgccaaaaag
ttgttggaggccattccttcttctgcagtagactacttcagaaaatctgctcaggagctc
atagatgaaaaaggggcagttgctgccctggctgcagctctagcccatatttctggggca
tcttacatacagcagcgctccttactcaactcgactgtgggctttgtgaccatggtgtta
aaatgttcaatagaaatgcgtaccatgagctatgcctggcgaggactgaaagagcagctt
ggtgaggaagtagatgccaaagtatctgcaatgcgtttcctcaaggggaagacgggggtg
tgctttgatatccccgttggtgaactgagtaacatacaggaacagtggacggacaccagg
cgctggcagctgtccatggcaaaggaattgccagagctggaagagtacccccaggaggcg
ggacgagggttctccaggtttggaagcgggaggcaaggtgatggcggcttcaagagaaac
aactgggttaagaatggaaaccggggacgtgattttaacaggtcgcttgattga
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