Opisthocomus hoazin (hoatzin): 104338977
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Entry
104338977 CDS
T08436
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oha03036
]
104338977 (CHD9)
Chromosome and associated proteins [BR:
oha03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104338977 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
104338977
NCBI-ProteinID:
XP_009943376
LinkDB
All DBs
Position
Unknown
AA seq
2863 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NPQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFSCSPIHPQSQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRLQQ
SRNNTGQDALSQPKDFMEVNASTSHRVGVNHPPPISNPSTSQQPLSVQQFSQTPSASLHF
CGNQEGNFGGQSPTITPCSVNNSQQFSSPYSYSSNHISPTSLLQSTTTLSSSQQTHSISD
FTGSDAFTSQTGTKQETTEHMLNPNTPLNSNSFQMLHSAHPQGNFSSSKLSPVNINFPAS
AGSASQISHFTDPIESNGFTSLDENLLHQVETHNEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEHHITPQQVTQSSDLLRAQSQSQIHPWHSSVSNQHLQDRSRVTLQGRP
PSKRTDGSGSYTKLQNAQVRAMSEKKQRKKADSESKQEKANRIISEAIAKAKERGERNIP
RVMSPENFPSVSAEGKEEKKGRKVKTKPKDKESKKPKTASASKIKEKTKIGKLIITLGKK
QKRKNESADEFSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEANFFFLF
CSGNFRENPSEEDAAIVDKILSSRIVKKEISAGMTVETEEFFVKYKNYSYLHCEWATEQQ
LLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSLCEDKDTGEPVIY
YLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNSWKKIEKSREYK
NGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLAGIRGPFLIIA
PLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYCRDSQGRIVRGTYRFQAIITT
FEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEE
LFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEE
TIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEE
KILGEFRETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKVGGHKVLIFSQMVRCLDILE
DYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCII
FDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMS
GRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESE
GRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTR
PFSATKDELAELSEVESEGDDKPKLRRPYDRSNGYGRTECFRVEKNLLVYGWGRWREILS
HGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLS
APVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLY
YLKQEVIGNEFQKVFDGIDASEIDVWVPEPDHSEVPAEWWDADADKSLLIGVFKHGYEKY
NTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPAMFKDDIEDDVSSP
GDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQIQPAFPVQTSIM
QPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRFDWTKFRAMARL
HKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASRTLYRIELLRKVR
EQALRHPQLFERLKLCQPNPDLPVWWECGAHDRDLLIGAAKHGVSRTDYHILRDPELSFM
SAQRNYNQNKVALSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAFEDTKAKNENLKED
PQSSEEESMSTEETQPLMKSEPLSPKNGTPIQNTDHKPSIKTETDRRMVAARTEPLTPNP
ASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSGSSSSSSSSCSSA
SSSSSSSSSSSSSSSSSSSEESDSDEEEAQKREGTPHIKAYDEESVASLSTIQDETQDSF
QMNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARKSYDSNTVAS
FYTTKLLDSPGAAADYSEPSAPTPPLAGVKEEYDQSPQMSKEGGLKLTFQKQGLSQKRPF
ESEEGTLGQQQYLARLHELQNASETSLVNFPKSLPESGTSSHLTAGANGVIADSQPVVKK
RRGRRKNVEGVDVLFINRNKQPNHVNQGINSCQVAAGINPVLTYTQSQGMLDAESPVPVI
NLKDGTRLAGDDAPKRKDLERWLKEHPGYVEDSGACIPRMQLHDGRPKQKRHRCRNPNKL
DVNSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENPEYGVAPEWGEVVKQSGFLP
EGMFDRILTGPVVREEVSRRGRRPKSEIAKATAAAAAATAASVSVNPLLANGLLPGVDLP
SLQALQQNLQNLQSLQVTAGLMGMPAGLTTGGEAKNMAAMFPMLLSGMAGLPNLLGMGGL
LTKSTESVSEEKKGSDSKEADIKKERTEDQNTDTGGENSVSSSPSTSSAAAAANPLSLNP
LLLSNILYPGMLLTPGLNLHIPALSQSNIFDVQNSESNDTGSAKPTEEKEENSRVRDQED
KGGAEPSSHNENSTDEGSEKADASSGSDSTSSSSEDSDSSDED
NT seq
8592 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcgttgaaccatgtgcaagatgctcaa
aatccacagaagatgagtgagtttgatcagctgaatcagtatgattcattgaaacttcac
tcagtaaatcagtcttttaatagctcagctgacaacgtcttatcaccacactctcaattc
agttgttcaccaattcatccgcaaagccagtctaatgggatgtttccagatgtggctgat
ggtagtcctatgtggggacatcaaactgccacaactgtttcaaatcaaaatgggtccccc
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccacagcatcagtgtgcctcactacggttgcaacaa
agcagaaataacacggggcaagatgctttgagtcagccaaaagacttcatggaagttaac
gcgtctacttctcacagagttggtgttaaccacccacctccgatttctaatccatcaact
tcacagcagcccctgtctgttcaacagttttctcaaactccaagtgcttcgctacatttt
tgtgggaatcaagaaggaaattttggtggacagtccccaactattactccatgttctgtc
aataatagccaacaattttcatctccttattcttactccagtaaccacatttctcctacc
agccttcttcagtctacaacaactctttcttctagccagcagacacactctatctctgac
ttcactggaagcgatgcctttacatctcaaacagggaccaagcaagaaacaactgagcac
atgttgaatcctaatacacctttgaattcaaatagttttcaaatgttgcattctgcacat
cctcagggcaactttagtagttcaaaactctctcctgtgaatattaattttccagcttct
gctggttctgcttctcagataagccatttcactgaccccattgaaagcaacggttttaca
tctttagatgagaacttacttcatcaagtcgagactcataatgaaccatttacaggactt
gacccagatgacctccttcaggaagacctcctgccacagtttgatgattctgcgtttgtt
caggatagcacaagccatgttttagagcatgacctagaacatcatataacgccacagcaa
gtaacacagtcgtctgatcttcttcgggcacagtctcaaagtcagatccatccttggcat
tcttcagtttctaatcagcatctgcaagacagaagtcgtgtaaccttacaaggacggccc
ccttccaagaggactgatggttcaggatcatatactaagttgcagaatgcccaggtgagg
gcaatgtctgaaaagaagcagaggaaaaaagcagactcagaaagtaaacaagagaaggca
aatcgcataatatctgaagcaattgcaaaagcaaaagagagaggagagagaaacattcca
cgagtaatgagtcctgaaaacttccccagtgtttcagctgaaggaaaagaggaaaagaag
ggtagaaaagttaaaaccaaaccaaaggacaaggagagcaaaaagccaaaaactgcttcc
gcatccaaaattaaagagaaaacaaaaattggaaagctaatcatcacactgggtaagaag
cagaaaagaaaaaacgaatctgctgatgagttttctgatgctaagcaaactccgcagcgg
ccattgaaggatgaagactcacagaagagaagatcaaatcgtcaagttaaaaggaaaaaa
tatgctgaagaaggagagggaaaacaatcagaagaagaagctaatttttttttcttgttc
tgcagtgggaactttcgagaaaatccgagtgaagaagatgcggcaattgttgacaaaatc
ttatcctccaggatagtaaagaaagaaatatctgctgggatgacagtagaaacggaagag
ttttttgtaaaatacaagaactactcttatctccactgtgagtgggccacagaacaacag
cttttaaaggataaaagaatccagcagaaaataaaacgattcaaactaaggcaagcacaa
agagctcacttttttgcagatatggaagaagaaccttttaatcctgactatgttgaagta
gaccgggtattagaagtatctctttgtgaagataaggacactggtgagcctgttatttac
tatttagtaaaatggtgttcgttgccatatgaagacagtacgtgggagctgaaagaagat
gtagatcaagcaaaaatagaagaatttgaacaattgcaagcttccaggcctgactcaagg
agactggaccgaccacctccaaactcgtggaagaagatagaaaagtccagggaatataaa
aatggcaatcagctcagggaataccaactggaaggacttaactggctcctgttcaactgg
tacaataggcgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcagtca
attacattcctttatgaaatcctcttggctggtataagagggccttttctcatcatagct
ccactttccactataacaaactgggaaagagaatttcgcacgtggactgaccttaatgtt
gtagtgtatcacggaagcatgatcagcaggcagatgattcagcagtatgaaatgtactgc
agggactcccagggacgtattgttcgaggtacctacagattccaagccattatcacaact
tttgaaatgattcttggtgggtgtccagaattaaatgcaattgagtggcgatgcgttatt
attgatgaagctcacagactgaagaacaaaaattgcaaactcctggaaggactaaaatta
atgaaccttgagcataaagtgctgttaacgggtaccccgctgcagaacacagtagaagaa
ttatttagcctgcttcattttcttgaaccgttacgttttcctgcggaatctacattcatg
caagaatttggagaccttaaaacagaggaacaggttcagaaactacaagctatcttgaaa
cccatgatgctcagacgattgaaagaggatgtagaaaaaaaactggctcctaaggaggaa
actataattgaagtagaactaactaatattcagaagaaatactatcgagcaattttggag
aaaaactttgctttcttatccaagggagcaggacaagcaaacgttccgaatctggttaac
actatgatggaactcaggaagtgttgtaatcacccgtatctcatcaaaggagctgaagag
aaaatccttggagagtttagagaaacgtatagcccaagtgctcctgacttccatctgcaa
gcaatgatccagtctgctggtaaattggttcttattgataaacttcttccgaaaatgaag
gtgggaggccacaaggtccttatcttctctcagatggtgcgctgccttgatattttggag
gattacctcatacataaaaggtacttatatgaacgaattgatgggcgagtacgaggcaat
ctcagacaagctgcaattgaccgcttcagcaaaccagattctgatcgctttgtcttcctt
ctgtgcaccagagctgggggcttgggcattaatttgactgcagcagatacgtgtataatt
tttgattctgactggaatcctcaaaatgatctgcaggctcaagcccgttgtcacaggatt
ggtcagaacaaagcagtgaaggtctacagactgataacgcgtaactcctatgagagagag
atgtttgacagagcaagtctgaaactgggactggataaggctgtcttacagagtatgagt
ggaagagaaaacagtgtcggtggtatccaacaactctccaaaaaagaaatagaagacttg
cttcgaagaggtgcatatggtgccattatggatgaagaagatgaaggctctaaattctgt
gaggaagacattgaccagattttgcagcgtcgtactaaaactatcacaattgaatcagag
ggaaggggctccacgttcgccaaggctagttttgttgcatctggaaacaggactgatatt
tcactagatgatcccaacttctggcagaaatgggccaaaaaagcagaaatagatatagat
gctatcagtggtagaaacagcctggttattgataccccaagaattaggaaacaaactcgc
ccttttagtgctacaaaagatgagctggccgagttgtctgaagtggagagcgagggtgat
gataaaccaaagctccgcaggccttatgaccgttccaatggatacggaagaacagaatgc
tttcgggtggaaaaaaacctgctggtttatgggtggggtcgatggagagaaattttgtcg
catggtcgcttcaagagacagctgaatgagcaggatgtggagataatttgccgagctctg
ttagcctattgtcttgtgcactacagaggggatgagaaaataaaaagttttatatgggat
ctcattaccccaacagaggatgggcaaacacgagagttacagaatcatcttggcttatca
gcccctgtgcctagaggaagaaaaggaaaaaaagtgaagacccaggctagcacttttgat
atacataaagcagaatggcttcgaaaatacaatccagaacatctgttgcaagatgaagga
tacaaaaagcacataaaacaccattgcaacaaggtcttgctgcgagtaagaatgctgtat
tacttaaaacaagaagtcattggtaatgaattccaaaaggtgtttgatggaattgatgcc
agtgaaattgatgtttgggtccctgagccagatcactctgaagttcctgcggagtggtgg
gatgcagatgcagataagtcccttctgattggagtttttaagcatggttatgagaaatac
aacactatcagagcagacccagcactatgcttcttggaaagggttggcaagccagatgaa
aaagcagttgctgccgaacagagagcaaatgattatattgatggagatgtagaagatcca
gaatacaagccagcaccagcaatgtttaaagatgacatagaggatgatgtttcatcccca
ggtgatctagtaatagcagatggagatggacaaatgatggaaggagacaaaatctattgg
cccactcagtctgccttaacaacacgccttcgccgcctaataacagcttatcaacgaaca
agtaaaaataggcaggcccagcagatccagccagcattcccagtacaaactagtattatg
cagcctccatacgaagaagctgctctaaatccaaagatggctgctaagattgaaagacag
caaaggtggacgagaagagaagaagctgacttttacagagttgtgtccacgtttggagtg
gtgtttgatcctgaaagggggcgatttgactggaccaagtttagagcaatggctaggcta
cataagaaaactgatgagagcttagagaagtacttgtatgcatttatgtcaatgtgccgg
agagtctgtcgtctcccctcaaaagaagaactcgtagacccaaacatttttatccaacca
attacagaggagcgtgcttctcggactttgtatcgcattgaactcctaaggaaagtgcga
gaacaagctcttagacacccgcagttgtttgaacgactaaagctgtgccagccaaaccca
gacttgcctgtctggtgggagtgtggggctcatgacagggatttacttattggagcggca
aaacatggagttagcaggacagattatcatattcttcgtgatcctgaactatcatttatg
tctgctcagaggaactataatcaaaataaagtggcactctcaaggacttctactccactc
ttgcatcagtaccagatggcattatctgcttctcctcttacacctcagtcaagattgtca
gatgctaaagtaaatgcttttgaggatacaaaagctaaaaatgaaaatctgaaagaggac
cctcagtcttctgaagaggaatctatgtctacagaggagacacagccactaatgaaatct
gaacctttgagtccaaaaaatggcacaccaatacaaaatacagaccacaaacctagcatc
aagacagaaacagacaggcgcatggtggcagcaaggacagagcctctaactccaaaccca
gcttccaaaaaacagagagtcagcaagaggggatctgactccagctctgactcggactct
gactcagatagatcatcctgttcttccaggtcatcttcttcatcctcttcctcttcctca
tcttgttcacactctcgatcaggctctagctcttcatcatcttcatcttgttcttcagca
tcttcgtcatcatcatcctcctcatcgtcgtcatcatcgtcgtcatcatcatcatctgaa
gagagtgatagtgatgaagaggaggcacaaaaacgtgaaggaactccgcatataaaagca
tatgatgaagagagcgtagcctctctgagtactatacaagatgagacgcaagacagtttc
cagatgaacaacgggaccccaaattccagttacctcctacaaggtggatacatgttggct
gcatcctactggccaaaggatcgagttatgattaatcgacttgacagtatttgtcaaacg
gtgttgaaaggtaaatggccttcggcaagaaagagctatgacagcaatacggtggcatct
ttctacacaaccaaacttctggatagcccaggtgcagctgcagattacagtgagcccagt
gcaccaacaccccctcttgcaggtgttaaagaagagtatgatcagtcgccacagatgtca
aaggaaggtggtttgaaattgacttttcagaagcagggactgtctcagaaaaggccattt
gaaagcgaggaaggtacattgggacagcagcaatacctggctcggctacatgaactccag
aatgcttcagaaaccagccttgtcaacttccccaaatcacttcctgaatcaggtacttcc
agtcacttaacagccggtgccaatggagtcatagctgacagccagcctgtagtaaagaag
agaagaggaagaaggaagaatgtggagggagttgatgtcctctttataaatagaaataaa
cagcctaaccatgttaatcaaggtattaactcctgtcaagtcgctgcaggaataaaccca
gtactcacttacacgcagtcccaaggcatgcttgatgcagagagtccagttcctgttatt
aacctgaaagatggaacaaggcttgcaggtgatgatgcccccaaaagaaaagatttagaa
aggtggcttaaagaacatcctggatatgttgaagattcaggagcttgtattcctaggatg
cagctgcacgatgggaggcccaaacaaaaaagacaccgttgtcgaaaccctaataaactg
gacgttaatagtttgactggtgaagaacgtgttcagctcataaatagaagaaatgcaaga
aaggtagggggtgcgtttgctccccctctgaaggatttgtgcagattcttgaaagaaaat
ccagagtatggagtggctcctgaatggggagaagttgtgaaacagtctggatttcttcca
gaaggcatgtttgaccgtattctcactggacctgttgtgcgggaagaagtaagccggaga
ggaaggcgccccaaaagtgagattgctaaagcaacagcagctgcagcagctgccacggct
gcaagtgtgtcggttaaccctctgctagcgaacggactgcttccaggagtggatctgcct
agtcttcaggccttacaacaaaacctgcaaaacctgcagtcgctgcaagtaaccgcagga
ttaatgggtatgccagctggcttaactaccggaggagaagcgaagaacatggctgctatg
ttccccatgctgctgtcagggatggctggattaccaaacttgctgggcatgggaggactt
ctaacaaagtctacagaatctgtttcagaggaaaaaaagggaagcgattcaaaggaggca
gatataaagaaagaaaggacagaagaccaaaatacagatactggtggtgaaaactctgtt
tcaagttctccttcgacatcctctgctgctgcagctgccaatcctctctctcttaaccca
ttacttttgtccaacatactttacccagggatgcttctcactccaggccttaatcttcat
atcccagctttgtctcagtctaatatttttgatgtacagaacagtgaaagcaatgacacg
ggctcagccaagcccacagaagaaaaggaagaaaattctagggttagagatcaggaagac
aaagggggagcagagccaagctctcacaatgaaaacagcacagatgagggttcagaaaaa
gcagatgcttcatctggatctgatagtacatcgtcttcatctgaggattcagattctagc
gatgaagactga
DBGET
integrated database retrieval system
