Opisthocomus hoazin (hoatzin): 104338981
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Entry
104338981 CDS
T08436
Symbol
COL18A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oha04147
]
104338981 (COL18A1)
00535 Proteoglycans [BR:
oha00535
]
104338981 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
oha00536
]
104338981 (COL18A1)
Exosome [BR:
oha04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104338981 (COL18A1)
Proteoglycans [BR:
oha00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104338981 (COL18A1)
Glycosaminoglycan binding proteins [BR:
oha00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104338981 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
104338981
NCBI-ProteinID:
XP_009943383
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MRMCLLPKQQELAYAEPARLGQMFSCVGRGDPVSLSRDDMVGQHDRGVENLSAEVSLLEL
IGDPPPEEILKIYGPDNNPGYVFGPNANTGQVARYHLPSPFYRDFSLLFHIQPTTPRAGV
LFAITDSSQSIIYVGVKLSELRAGRQQIIFYYTEPGSPSSYAAATFTVPTLLNQWTRFAI
SVEEDEVILYLDCEEHERVHFERSPDEMELEDGSGLFVAQAGGADPDKYQGVIADLKLQG
DPRAAERQCEEEEDDAEEVSGDFGSGAEGGHRPSGKDRGSPQQAERTRVEETLRVSAGGT
GPKGEKGEKGERGLKGDSGTSSVVGTGSVKGEKGEKGELGVKGSAGFGYPGTKGQKGEPG
EPGPPGTLSQHTDGPSSKHDKLVGAPGETGTWTFIDMEGSGFGSDLETLRGPRGPPGPPG
PPGVPGLPGEPGFFXNRTDLPVPPGLPGRDGTPGPPGPAGPQGPPGRDRVAGQPGPKGER
GDVGDLGLPGAPGPKGDMEGSGLPFGTSSPGPPGPEGPQGVPGLPGVKGEVGSPGQPGLP
GPKGDAGMPGVDGRPGLEGFPGPQGPKGDRGSPGEKGERGQDGVGLPGPPGPPGPPGQVI
AVSSEDKSLAALPGPEGRPGHAGFPGPVGPKGDRGSSGPQGSPGLKGEKGEPGVIISPDG
TVVTAKVKGEKGEPGLRGPTGPSGPQGRAGMKGEIGFPGRPGRPGMNGLKGEKGDPADVS
GILGLRGPPGPPGPPGPPGPPGSIVYDSSNVSTSFQVKRERKGMPEPRDPQRALPTYQAM
LSAAHELPEGGLVFLTDRQELYVRLRGGFRRVLLEEHTLMPSSALELGARPKSPLLGPWG
LLQPKPQHPTQARDHPVAVRGLPQMASVLSR
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgtgcctgctgccaaaacaacaggagctggcgtacgccgagccggctcgcctc
ggccagatgttcagctgtgtcggccggggtgaccccgtgagcttgtcccgggatgacatg
gtgggtcaacatgatcgtggagtggagaacctgagcgccgaggtcagcctcctggagctg
atcggagaccccccgccagaggagatcctcaaaatttatggccccgacaacaaccctggc
tatgtctttggccccaatgccaacacgggccaagtggcccggtatcacctgccgagccct
ttctaccgggacttttccctcctgttccacatccagcccaccaccccccgggccggtgtg
ctctttgccatcacggactcctcgcagagcatcatctatgtgggcgtcaaactgtcggag
ctgcgggcaggcaggcagcagatcatcttctactacacagagccaggctcgccaagctca
tatgcagcagccaccttcactgtgcccaccttgctcaaccagtggacgcgttttgccatc
agcgtggaggaggacgaagtcatcctctacctggactgcgaggagcacgagcgggtccac
ttcgagcgctccccggatgagatggagctggaagacggctccgggctctttgttgctcaa
gctggaggagctgacccagataaataccagggcgtgattgccgatttgaagctgcaaggg
gacccgcgggcggccgagcgccagtgcgaggaagaggaggatgacgccgaggaggtctct
ggtgatttcggcagcggggcggaaggcggacaccgaccctcagggaaagacaggggctcc
ccgcagcaagccgagaggacccgagtggaggagacactgcgggtctctgcgggaggcacc
ggccccaaaggtgaaaagggggagaagggtgagcgtggcttgaaaggggactcggggacc
agcagcgttgtgggcacaggcagcgtgaaaggcgaaaagggggagaaaggagagctgggc
gttaagggcagtgctggatttggctaccctggcaccaagggccagaaaggggagccgggt
gagcccggtccccccgggaccctctcgcagcacaccgatggaccctcatccaagcatgac
aagctggtgggtgcccccggggagacagggacttggaccttcatcgacatggagggctcc
ggctttggcagtgacctggagaccctgcggggtccacgagggccgcctggtcccccaggg
ccacccggcgtgcctggtttgccaggggagccgggattttttnggaaccgcacagacctg
ccggtaccacctgggctgccgggcagggatgggacccccgggcccccggggccagcgggt
cctcagggtcctcctggaagagacagagtggctgggcagccggggcccaaaggagagcgg
ggtgatgtgggcgacctcggcctccctggcgcgccgggacccaagggtgacatggagggc
tcggggctgccgttcggcaccagctcccccggaccacccggacccgaaggaccacagggg
gtgccgggactgccgggggtgaagggggaggtcggcagccctgggcagcctggcttgcca
ggaccaaagggagatgctggcatgcccggcgtggatggccgccctggcctggagggcttc
cccgggccacagggacccaaaggcgaccgaggcagccccggcgagaagggtgagcgaggc
caagatggtgtggggctgcctggcccccctggtccacccggtccccccggacaggtcatc
gctgtctcaagtgaagataagtctttggcggctttgcccggtccggagggcagaccaggt
cacgccggcttcccgggcccagtgggacccaaaggagaccgagggtcgtctggtccccag
ggctccccggggttgaagggggagaagggggagcctggagtcatcatcagccctgatggg
accgtggtgactgcgaaggtgaaaggagaaaagggggagccggggctgcggggaccgacg
ggaccctcgggtccccagggaagagcagggatgaagggagagatcggctttccgggcaga
cccggacgtcccggcatgaacgggctgaagggcgagaagggtgaccccgccgatgtcagt
ggtatcctgggcttgcggggtcccccaggacccccgggtcccccagggccccctgggcca
cctggcagcatagtctacgacagcagcaatgtttccaccagtttccaggtcaaaagggag
agaaaggggatgccggagccccgggacccccagcgtgccctgccgacctaccaggcgatg
ctgagcgccgcacacgagctgcccgagggcgggctcgtcttcctcaccgaccggcaagag
ctctacgtccgcctgcgcgggggcttccggcgtgtgctgctggaggagcacaccctgatg
cccagctcggctctggagctcggggccagacccaaatccccgctgctggggccatggggt
cttctccagccgaaaccccagcatcccacccaagcaagggaccatcccgtggcggtgcgg
ggactcccccagatggcctccgtcctctccaggtaa
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