Opisthocomus hoazin (hoatzin): 104339098
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Entry
104339098 CDS
T08436
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03013
Nucleocytoplasmic transport
oha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104339098 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
104339098 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104339098 (THOC2)
03041 Spliceosome [BR:
oha03041
]
104339098 (THOC2)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104339098 (THOC2)
Spliceosome [BR:
oha03041
]
Complex C
Other components
EJC/TREX
104339098 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104339098 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
104339098
NCBI-ProteinID:
XP_009943537
LinkDB
All DBs
Position
Unknown
AA seq
1661 aa
AA seq
DB search
MVEGSKRLQKQSVFCKEFGVLALCWRVSLTLALLLLWRLLPRLYEATRRLRTVKPTPGLG
RSPGYPGYPSYPQLTVLRWHGEQQRQAPVQLCRALSENKSHDNMVFRDIQQALYELAYHV
VRGNLKHDQASNVLGDVIEFREDMPSVLADVFCILDIETSCLEEKSKRDHFTQLVLACLY
LVSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLI
AELGQELSGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYM
YMCEPQTLCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNTII
EEHKREIVEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIG
DWQHAQSIMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISPLPNKR
APKQADSFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKM
EILFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHP
LLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITP
VVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIE
LAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYF
GQIRNTKKSSQRLKEALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDT
LVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKA
EKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPH
SSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRL
KLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLC
YDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRA
TGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPK
VLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNA
VAATVQNGPGGAGMPTSLTINTVRLEEGTTEETDKLKEKSQGVVKVVNKAVNATPKVTTS
NGNSASNSKIIKEKDEKEKSGKEKDKEKKEKTPAATPEMKALGKDGKDKPKEERANKDDK
AREIKEKTPKADKEKEKVKKEEKASKEEKSKTVVTIVESKSTADKEREKEPSRERDVAKE
MKSKENAKGGEKMPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELK
DSSAKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREA
PQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEK
SSSGSKKESRHDKEKAEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagggatccaagcgtttgcagaagcagtcagtattttgcaaggagtttggtgtg
ttagctctctgttggcgagtcagtctaacgctggctctgctgcttctgtggcggctgctc
ccacgcctgtacgaagctacacgccgcttacgcactgtgaagccgactcccggcctcggc
cggagccctggttaccccggttatcccagttacccgcagctgacggttctacggtggcat
ggggaacagcaacgccaagcacctgtgcaactgtgtcgcgctctcagtgaaaacaaaagc
catgataatatggttttcagagacatccagcaggctttgtatgagcttgcataccatgtt
gtcagaggaaacttaaagcatgatcaagcttctaatgttcttggtgatgtcatagaattt
agggaagacatgccttctgtcctagctgatgtattctgcatattagatattgaaacaagc
tgtttagaagaaaagagtaagagggatcattttacccaattggtattagcctgtttgtat
cttgtttctgatactgtcctaaaggagcgtttagatccagagacactggagtcattagga
cttatcaagcagtctcaacagttcaaccagaaatctgttaaaataaagacaaaactattt
tacaagcaacagaagtttaatttgctaagagaggagaatgaaggttatgcaaagctcatt
gcagaacttgggcaagaattgtctggaaatatcactagtgatttaatccttgaaaatatc
aaatctttaataggatgttttaaccttgaccctaacagagttttggatattatcttagaa
gtctatgaatgcaggcctgagtatgacgacttctttgtaccactgatagagtcttatatg
tacatgtgtgaacctcagactctatgccatatccttgggttcaaattcaaattttatcag
gatccgagtggtgagacaccttcctccttatacagagttgctgctgtccttttgcaacat
aatctcatagatttggaggatctttatgttcatctgcttccaggggataataccatcatt
gaggaacacaagcgagagatagtggaagctaagcaaatcgtcagaaaacttacaatggtc
gtcttatcctctgaaaagactgaagaaaaggagaaggaaaaagaaaaagaggaggagaaa
actgaaaagcctcctgataatcagaagcttggcttattggaagccttattgaaaattggt
gattggcagcatgcacaaagtattatggatcagatgcctccgttttatgctacttcacac
aagcctattgcaattgccctttgccagcttgtacatgtgacaattgaacctctgtaccgc
agagttggtgtacctaaaggagctaaagggtcaccaatttctcctttgccaaacaagaga
gcaccaaaacaagcagacagcttcgaggacttgagaaaggaagtattcaacatgctttgt
taccttggtcctcatctatcccatgatcccattttatttgcaaaagtggtgcgccttgga
aaagcctttatgaaagagtttcagtctgatggaagcaaacaagaagataaagagaaaatg
gagatactgtttagctgtttgttgagtattaccgatcaagtcttacttccatctctttct
ttgatggactgcaatgcgtgcatgtctgaagaattatggggaatgttcaaaacttttccg
taccagtaccggtaccgtctttatgggcagtggaagaatgaaacatacaatagtcaccca
cttctagtgaaagttaaagctcaaaccatagaccgagccaaatatataatgaagcgttta
actaaggaaaatgtgaaaccctctggaagacaaattgggaagctcagccacagcaatcct
acaattttgtttgattatattttatcacaaatacagaaatacgataacttaataactcca
gttgttgattcactgaaatacctcacttcactgaactacgatgttctggcatactgtatc
attgaagctctggcaaaccctgagaaggagagaatgaagcatgatgacactacaatctcg
agctggctgcagagtctggctagcttttgtggtgcagttttccgaaaatacccaattgaa
cttgctggtctacttcaatatgtagccaaccaactgaaagctgggaaaagctttgatttg
cttattttaaaagaagtagtacagaaaatggcagggatagaaataacagaagaaatgaca
atggaacaattggaagccatgactggtggagaacaactaaaagctgagggtggatacttt
ggccaaatcaggaacacaaaaaaatcttctcagagattaaaagaggcattattggaccac
gatcttgcccttccactgtgcctgcttatggctcaacagagaaatggtgtgatctttcaa
gagggaggggaaaaacatctgaagctggtgggaaaactgtatgatcagtgccatgacacc
ctggtacaatttggtgggtttttagcatccaatctaagcacagaggattacattaagcga
gtgccttctattgatgttctctgcaatgagtttcacacccctcatgacgctgcatttttc
ctctcaagacccatgtatgcacaccatatttcatcaaagtatgatgaactaaaaaaagcc
gagaagggaaataaacagcagcacaaagttcacaaatacattacatcatgtgagctggtg
atggctcctgttcatgatgctgtgatttctctgcaccttcccaaggtttgggatgacatc
agtcctcagttttatgctacgttttggtctttgacaatgtatgaccttgctgtcccacat
agtagctatgacagagaagtcaataaactgaaagtccagatgaaagccatagatgacaat
caggaaatgcctccaaataaaaagaagaaagaaaaagaacgttgcacagctcttcaggac
aagctccttgaagaggagaagaagcagttggagcatgtgcagagggttctacagaggctg
aaactagagaaggataactggcttctggcaaagtctaccaaaaacgagactatcacaaaa
tttctgcagttatgtatatttcctcgatgcattttttcggcaatcgatgcagtttattgt
gctcactttgtggaacttgtgcatcagcagaaaacacccaacttctccacacttctctgc
tatgacagagttttctctgatattatatatacagttgcaagttgcactgaaaatgaagct
agtagatatggcaggtttttatgctgtatgctggagactgtgactagatggcacagtgac
agagtcatatatgaaaaggaatgtggcaactatccaggcttcttaactatattacgggca
actggatttgatggtggaaataaggctgatcagttggattatgagaattttagacatgtg
gtacacaaatggcactataaattgactaaggcttctgtgcactgccttgaaacaggtgaa
tatacacacatcagaaatatcctgattgtgctgaccaaaatccttccatggtatccaaaa
gtgctgaacctgggccaagccttggaaagaagagtacataagatatgtcaggaagagaaa
gagaagagacctgatctatatgcattggctatgggctattctgggcagttgaaaagtagg
aagcctttcatgatacctgaaaatgaattccaccacaaagacccacctgccaggaatgct
gtagctgcaacagtacaaaatgggccaggtggtgctgggatgcctacatctctcacaata
aatacggttagactggaagaaggcactactgaggagactgataaactaaaggagaagtct
cagggtgtggtgaaagttgttaataaagctgtcaatgctacaccaaaggtgacaacaagc
aatggaaacagtgcttctaatagcaaaattattaaagagaaagatgagaaagaaaaaagt
gggaaggaaaaagataaagaaaagaaagagaagactccagctgccactccagagatgaag
gcacttgggaaggatgggaaagataaaccaaaggaagaaagggcaaataaagatgataaa
gcaagagagatcaaggagaaaacgccaaaagctgacaaagagaaggaaaaggtcaagaaa
gaagaaaaagcttcaaaagaagaaaaatccaagacagttgttaccatcgttgagtcgaag
tcaactgcagataaggagagagaaaaggaaccgtccagagaacgagatgtagcgaaggaa
atgaaatccaaggaaaatgctaaaggaggagaaaagatgccagtagctgggtccttgaag
tcacctgttccccgatcagaaacatcagaatctgaaagggaacaaaaacgccgcaaagtt
gatacacattcttctccatcacattcctcaacagtaaaggacaacctcaacgaactcaag
gactcttcagcaaagcactacattaaccacactactccaacactgtccaagagtaaggag
agagaagtggacaagaaagatttggacaagtcaagggaaagatccagagagagagagaag
aaagatgaaaaggacaggaaagatcgaaaaagggatcattcaaacagtgacagagaggca
ccccaggattcgactaaacgacgcaaagaggaaaatgggacaactggttcttcaaaacat
agtaaaagtgagagtccttctgattcccctcgcttaaatgaaaaggagaaggagaagaac
aaatcaaaatcttcaggaaaagagaaaggtgattcaattaaagcagagaagatggagaag
agctcctctggtagcaaaaaggaatcaagacatgataaagaaaaagcagaaaagaaagaa
aaaagagacagtactggagggaaagaagaaaagaaacatcataaatcttcagacaagcac
agataa
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integrated database retrieval system
