Opisthocomus hoazin (hoatzin): 104339184
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Entry
104339184 CDS
T08436
Symbol
RQCD1
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104339184 (RQCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104339184 (RQCD1)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104339184 (RQCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
104339184
NCBI-ProteinID:
XP_009943625
LinkDB
All DBs
Position
Unknown
AA seq
295 aa
AA seq
DB search
MAVHPVPTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIA
ALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLH
TVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATF
ILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPR
AREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPPPPQ
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacaccctgtgccaacagcgctggctcaggttgaccgcgaaaagatctaccag
tggatcaacgagctgtccagccccgagacacgggagaatgcgctgctggagctgagcaag
aagcgtgagtctgtgcctgaccttgccccgatgctctggcattcgtttggcacgatcgca
gcgctccttcaggaaattgtaaatatttatccatcaatcaaccctccgactttgacagcc
catcagtccaacagagtctgcaatgctttagctctactacaatgtgttgcatcacatcct
gaaacgaggtcagcttttctggcagctcatatccctctcttcctgtaccccttcttgcac
acagttagcaagacgcgtccgtttgagtacctgcggctcacgagcctcggagtgattggg
gccttggtgaaaactgatgagcaagaagtgataaatttcttattgacaacagaaattatc
cccctgtgcttacgcattatggagtctggcagtgaactctccaaaacggttgctacgttt
attcttcagaaaatcctcctggatgacacagggctggcatatatctgtcagacttacgag
cggttttcccatgttgccatgatactgggtaaaatggtcctgcagctctccaaggagccg
tcggcacggctgctgaagcatgtcgtccgctgctatcttcgcctttccgataaccccagg
gcacgtgaagctctcaggcagtgccttcctgaccagctgaaggacaccacctttgcccag
gtcctgaaggacgacaccaccacgaagcgctggctggctcagctcgtcaagaacctgcaa
gagggtcaggtcactgacccgcggggcatccctcctcctccgcagtga
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