Opisthocomus hoazin (hoatzin): 104339420
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Entry
104339420 CDS
T08436
Symbol
NFRKB
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104339420 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oha03036
]
104339420 (NFRKB)
Chromosome and associated proteins [BR:
oha03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
104339420 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
104339420
NCBI-ProteinID:
XP_009943879
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGEGNGARIMEDCMLGATRVSLPEDLLEDLNSPEIFFEVVSLST
WQEVLTDAQQDHLKKFLPHFPENNREHQNKLISALFGGENFRFGNPLHIAQKLFRDGHFN
PEVVKYRQLCFKSQYKRYLSSQQQYFYRLLKQILASRKHLLDLARKGGPDMTLRRKHFSP
TYDAEERDRRTHRRYLKILREVKEECGDTTLSSDEEDLSSWPPSSPAGCPSPPVPLRVIP
TLSTLDMKTADKIELGESDLKMMLKKHHEKRKRQPDHPDLVTTDLTLEDIMTRVNAGKKG
SLAALFDLATLKKKVKEKEDKKKKKLKMIKSEVEDLADSLSNADGIPSMSQDPSPIPLSS
VKEEPLEEMKPCLGINEISSSFFFLLLEILFLEGPATLSVLEDKVLDWQSSPASALNNWF
SFAPNWSELVLPALQYLTGDSRDVPSSFSPFVEFKEKTQQWKLLGSCQDHEKELAALFQL
WLETKDQTFFKENEDSSDATTPVPRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTF
RMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRA
EICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEE
FERIHQAQAAAAKAKKALQQKPKPPAKMKSSSKESSVKALPSSASEPSQLSLSDSSMPPT
PVTPVTPTAPALPATPISPPPMSVVSKSVSSAGSEPAKPSQSVLLVSSPTMPQLGTLLST
AQSSQTQPGPQPTPPXTAASGLPQVRVVTAQSSLPAVSQQAPVGTQQQQQPTSVPQIRVP
ATAAQTKVLPQAVMTLPVKAQSSPVQVQRPGSSVTGQTGITVTGLSAAPSPAVKPVTSSP
GSSATSTSSTTVIQNVAGQNIIKQVAITGQLGVKTQPGSGMPLTATNFRIQGKDVLRLPP
SSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFTAAAGSSASGKGISATLHVTSN
PVQTADSPAKTSTATSASSSPAGSTVVKVTPDLKTAEPTGSAFRLMPALGMTVADQKSKA
VTTVASTEAKPAATIRIVQGLGVMPPKAGQTITVATHAKQVPSSSAVSVPGTVHTSAVSL
PTMSAAVSKAVAVASGAAGTPITIGTGATAVRQVPVSTTVVSTSQAGKLPARITVPLSVI
SQPVKGKSVVTAPIIKGNLGANISGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQ
QQGQATQVRIQTVPASHLQQGTVSGSTKAVSTVVVTTAPSPKQTQDQL
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggattccctggatcacatgctgaccgacccgctggagctggggccctgcggggagggc
aatggcgcgcgcatcatggaggactgcatgctgggtgccaccagggtcagcctgcccgag
gacctgctggaggacctgaatagtcccgagattttctttgaagttgtcagcctgtctacg
tggcaggaggtgctgacagatgcgcagcaagaccacctaaaaaaattcctgcctcacttt
cctgaaaacaaccgagagcatcagaacaaactcatctctgcgctgttcggtggcgaaaac
ttccgtttcggaaatccactccacatcgcccagaaacttttccgggatggacacttcaat
cctgaagttgtgaaataccggcagctctgtttcaagtcccagtacaaacgctacctgagc
tctcagcagcagtacttctaccggctcctcaagcagatcctcgcttcccgcaaacacttg
ctggatttagctaggaaaggaggccctgatatgaccctgaggagaaagcacttctcaccg
acgtatgacgcagaagaacgagacagacggacgcatcggcgctacttgaagattctgagg
gaagtgaaggaggagtgtggagacaccaccttgtcttctgatgaagaagatctaagctcc
tggcctccgagttctccagcaggttgtccaagtccaccagttcccctgagagtgatcccc
acgttgtcaaccctggacatgaaaacagcagacaagatagaacttggggaaagtgatctg
aagatgatgttgaagaagcaccatgagaaacgaaaacggcagcctgatcaccccgatctg
gtgacgacagacctgactcttgaggacattatgactcgagtaaatgctggcaagaaaggt
tccttagcagctttattcgacctcgcaaccctcaagaagaaggtgaaggaaaaggaagat
aagaagaaaaaaaagctgaagatgattaaatccgaggtggaagatttggctgactctctc
agcaacgccgatggaatcccgtcgatgtctcaggatccttcccccatccctctgtcatct
gtcaaagaggaacctcttgaagagatgaagccgtgccttggaataaatgaaatctcttcc
agcttctttttccttcttttggagatactgtttctggaaggacctgctactctctctgtg
cttgaagataaagttctagattggcaatcttctcctgccagcgcactaaataactggttc
tcctttgcccctaactggtctgaactggttttaccggccttgcagtacttgacaggtgac
agcagagatgttccttccagcttctcaccttttgttgaattcaaggagaaaactcagcag
tggaaattgcttggttcttgccaagatcacgagaaggaattggcagcactgtttcagctc
tggttggagaccaaagaccagacttttttcaaagagaatgaagacagctcagatgccaca
acgccagttcccagagtaaggactgactatgtagtccgacctagcactggagaggagaag
cgcgtgtttcaggagcaggaacgttaccgttacagccagccccacaaagctttcactttc
cgtatgcatggctttgagtcggttgttggtcctgtgaagggggtgtttgacaaggaaacc
tcattaaacaaagcccgagagcattctctcctacgctcagaccgaccagcgtatgtcacc
atcttgtccctcgttcgtgatgctgccgctcgccttcctaacggagaaggaactcgtgct
gaaatctgtgagctgctgaaagattcccagttcctagcgcccgatgtcacaagtgctcaa
gttaatactgttgttagcggtgctctggatcggttacattatgagaaagatccctgtgtg
aaatatgatattggacgcaagttgtggatctacctgcaccgggacaggagtgaggaagag
tttgaacggatccaccaggcgcaagctgctgcagcaaaggccaagaaagctctgcagcag
aagccaaaacctccggctaaaatgaagtctagcagcaaggagagttctgtgaaagcactc
cccagcagcgcatcggagcccagtcagctgagccttagtgactccagcatgccaccgact
ccggtgactcccgtgacaccgactgcaccagcgttaccagcaacgcctatttcaccccca
ccaatgtccgtggttagcaagagcgtatctagcgctggatcagagccagcaaaacccagc
cagagtgttcttctggtgtcatcgcctaccatgccgcagctcgggacgttgctttccaca
gcccagagttcgcagacgcagcctgggccgcagccaaccccgcccnccaccgccgcctca
gggctgccgcaggtccgggtggtcacagcccagtccagcctccccgccgtgtctcagcaa
gccccggtgggaacccagcagcagcagcaacctacgtcagtgcctcagatccgcgttcca
gctacagccgcgcaaaccaaagtgctccctcaggccgtgatgactctgccggtaaaagct
caaagcagcccagtgcaggtgcaacgaccaggaagctccgtgacaggacagacaggcatc
actgtgacgggactgtctgcggcgcccagccccgctgtaaagcctgtaaccagctctcca
ggcagttccgctacgagcacctcctctaccaccgtcatccagaacgtagctggccagaac
atcatcaagcaggtggccattacagggcaacttggcgtgaagacccagcctggaagtggc
atgccgctgacggcgaccaattttcggatccagggaaaggacgtgttgcgcctgcccccg
tcctctatcaccacagacgcgaagggacagactgtgctgcgtatcaccccggacatgatg
gccaccctggccaaatctcaagtcaccaccgtcaaactgactcaggacctcttcacagcg
gctgcgggaagcagtgctagcgggaaaggcatctctgcaactttgcacgtgacgtccaat
cctgtccagactgccgattctccagccaagacgagcacggccacttcggcttcttccagc
ccagctggaagcacagtggttaaagtgactcccgacttaaagactgcagagccaacaggc
tccgccttccggctgatgcctgccctgggcatgactgtggcagatcagaagagcaaagcc
gtaacgacggtggcgtccactgaggccaagccggctgctactataagaatcgtgcagggg
ctgggggtgatgccacccaaagctgggcagacgattacggtagcgactcacgctaagcaa
gttccctcttcctcagcagtcagcgtgcctggcacggtccatacctcagcggtctcttta
ccaaccatgagcgccgcagtgtcgaaagcggttgctgtggcctcgggagctgctgggact
cccataactataggcacaggagccactgctgtgcggcaggtacccgtcagcaccacggta
gtgtctacatcccaggcagggaaactaccagcacgaataacagtgcctctgtcagtgatc
agccagccagtgaaaggcaagagcgtggtgactgcccccatcatcaagggcaacctcggg
gccaacatcagtgggttaggtagaaatatcatcctgactacgatgccagcagggacaaaa
ctgatcgctgggaacaagcccgtgagttttctgaccgcacagcaactacagcagctgcag
cagcaaggccaggccacgcaggttcgaattcaaactgtccctgcctcccatctccagcag
ggaacagtgtctggctccactaaagcagtttccactgtggtggtgacaacagctccatct
ccaaagcagacccaggatcagctatga
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