Oscillibacter hominis: H8790_02850
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Entry
H8790_02850 CDS
T11077
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ohi Oscillibacter hominis
Brite
KEGG Orthology (KO) [BR:
ohi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ohi03016
]
H8790_02850
Enzymes [BR:
ohi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
H8790_02850
Transfer RNA biogenesis [BR:
ohi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
H8790_02850
Prokaryotic type
tRNA splicing ligases
H8790_02850
BRITE hierarchy
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GFIT
Motif
Pfam:
RtcB
LbH_EIF2B
Motif
Other DBs
NCBI-ProteinID:
QNL44995
UniProt:
A0A7G9B614
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All DBs
Position
551688..552896
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AA seq
402 aa
AA seq
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MIEITGAHNTAKVFIDTIDETTRAQITTMCDQDFLENCRIRVMPDTHAGKGCTIGTTMTL
HDKVVPNMVGVDIGCGMETAILDEKSLDLEALDRFIRANIPVGMEIREHPHSYQTQADLS
ALRCFGQINEHRARHSIGTLGGGNHFIEVDRDDEGTLYLVIHSGSRHLGTEVARWYQEEG
YRSLSGNSRRQLQELLDALKAEGRFQEIEPALRAAKRRRPGGAVAQDLAYVEGALFDDYL
HDMALTQRFALLNRRAIVSEIVRGLGLTVRETISTIHNYIDTGTMILRKGAVSAQKGERL
LIPINMRDGSLLCVGRGNEDWNCSAPHGAGRLMSRHAAAAAFTVEEFRRSMEGIYTTSVG
RDTLDECPMAYKDMSAIVDNIGPTAEIIKIIRPVYNFKAGER
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattaccggcgcccacaacaccgccaaggtgtttatcgacaccatcgacgag
acgacccgggcgcagattaccaccatgtgcgaccaggacttcctggaaaactgccgcatc
cgggtgatgccggacacccacgcgggcaagggctgcaccatcggcaccaccatgaccctc
catgacaaggtggtgcccaatatggtgggcgtggacatcggctgcggcatggagacggcc
attttggacgagaagtccctggacctggaggctctggaccgcttcatccgtgcaaatatc
cccgtgggcatggagattcgggagcacccccattcctaccagacccaggccgatttgagc
gcgctgcgctgttttggccagatcaacgagcatcgggcccgccattccatcggcaccctg
ggcggcggcaaccacttcatcgaggtggaccgggacgatgagggaaccttgtacctggtt
atccactccggcagccgccacttgggcacagaggtggcccgctggtaccaggaggagggc
taccgcagcctctccggtaacagcaggcgccagctccaggagctgctggacgccctcaaa
gccgagggtcgcttccaggagatcgaacccgccctgcgggcggccaagcgccgccgcccc
ggcggggccgtcgctcaggatctggcctacgtggagggggccctctttgacgactacctc
cacgatatggccctcacgcagcgcttcgccctcctgaaccgcagggccatagtgagcgag
atcgtccggggcctgggcctgacggtgcgggagaccatcagcaccatccacaactacatc
gataccggcaccatgatcctccgcaagggggccgtctccgcccaaaagggggagcgcctg
ctcatccccatcaacatgcgggacggcagcctgctctgcgtgggccggggcaacgaggac
tggaactgctccgccccccacggagcgggccggctcatgagccgtcacgcggccgcggcg
gccttcacggtggaggagttccggcgctccatggagggcatctacaccacctccgtggga
cgggacaccctggacgagtgccccatggcctacaaggacatgtccgccatcgtggacaat
atcggccccacggccgagatcataaagatcattcgccccgtctacaacttcaaggcgggc
gagagatga
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