Candidatus Ornithobacterium hominis: MSHRCOH1_00220
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Entry
MSHRCOH1_00220 CDS
T09176
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
ohm
Candidatus Ornithobacterium hominis
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ohm03009
]
MSHRCOH1_00220 (rimK)
Ribosome biogenesis [BR:
ohm03009
]
Prokaryotic type
ribosomal protein modification factors
MSHRCOH1_00220 (rimK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
CAI9428620
LinkDB
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Position
1:complement(41618..42532)
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AA seq
304 aa
AA seq
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MKLIILSRSEFIYSTARLLEEAEYRNHDVEVIDPLQCKMVMRKNNPQILVYGEKLEKVDA
VLPRIGSTITHYGSAVIRQFEMMNTFTTLGSNALLRSRDKLRTMQLLSREGIDFPRTFYY
SSEAGIETEEILELIGGYPIVVKVLEGTQGLGVMLLDSKMAAVSVLEALHSLKAKFLIQE
YIKEAKGSDIRIIVAGNKVIATMKREGKEGDFRSNIHRGGMGSQVALSYKEETQALRACR
ALGLQIAGVDLIRSSRGPLILEVNSSPGLEGIEAATGRNIAEEMIQFIEYQVSKENYRKN
KYKG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatcattctttcgcgcagcgaatttatttattctacggcacgtcttctagaa
gaagcggagtaccgaaatcacgatgtagaagttatagaccctttgcaatgtaaaatggtc
atgaggaaaaataacccgcagattttggtttatggcgagaaactggagaaagtagacgcc
gttttgccacgcattggcagtactataacgcactatgggtctgcggtgatacgtcaattt
gaaatgatgaatacattcactacacttggaagcaacgcgctgctgagaagccgagacaag
ctaaggacgatgcagcttctatcgcgcgaagggatagattttcctcgcacattctattac
agtagcgaggcaggcatcgaaaccgaggagattttggaattaatagggggctaccctatt
gtggtgaaggtgctggagggaacgcaaggcctcggcgtgatgcttttagactctaaaatg
gcagctgtttctgtgctggaagccttacatagtttgaaggcaaagtttctgattcaagag
tacatcaaagaggctaaaggtagtgatattcgtataatagtggctggcaataaagtcatc
gcaaccatgaagagagagggcaaagagggtgatttccgctccaatattcaccgaggaggt
atgggctctcaagtggctttatcttacaaagaagaaacgcaagctctgcgagcgtgccga
gccttggggttgcaaatagctggcgttgaccttattcggtcaagtcgggggcctctgatt
ttggaagttaattcttcgccaggtttagaaggcatcgaagctgctacgggtagaaatatt
gcagaagaaatgattcagtttattgaatatcaagtttcgaaagaaaactatagaaaaaac
aagtacaaaggttga
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