Candidatus Ornithobacterium hominis: MSHRCOH1_02210
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Entry
MSHRCOH1_02210 CDS
T09176
Name
(GenBank) putative ATP-dependent helicase dinG-like protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ohm
Candidatus Ornithobacterium hominis
Pathway
ohm03030
DNA replication
ohm03430
Mismatch repair
ohm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSHRCOH1_02210
03430 Mismatch repair
MSHRCOH1_02210
03440 Homologous recombination
MSHRCOH1_02210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ohm03032
]
MSHRCOH1_02210
03400 DNA repair and recombination proteins [BR:
ohm03400
]
MSHRCOH1_02210
Enzymes [BR:
ohm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSHRCOH1_02210
DNA replication proteins [BR:
ohm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSHRCOH1_02210
DNA repair and recombination proteins [BR:
ohm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSHRCOH1_02210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
CAI9429007
LinkDB
All DBs
Position
1:complement(475218..476528)
Genome browser
AA seq
436 aa
AA seq
DB search
MNFAILDIEATGGKKGTEKIIDIAIYQFDGEKVTDQFASMVNPEREIDKFVQNLTGITQK
MVRRAPKFHELAKRIVEITKDCVIVGHGVDFDYRMLRQEFQSLGYNFEHKTLDTLTLSHQ
FLPNLETYSLGKLCKNLGIPLADRHRAAGDTRATLELFKILLKKDKTKNIIKAFGQNDPK
SKQQISKLLQLQRNLPTQSGIYYYLDADGKIFYLQAARNIQRSVNQDFTNTSKKSLHIQT
RVKEVHFEITGSFFIALLMQMEEEINHQNLIKNKQNYFKFGLFLNPTRIEKLNTTEGIPF
LIFPTKNKAYKALDSCETTEENLGNNEEISQGLKNITSNENHFILIDKGRTAEEKSFIEI
EKNEILGFGFFKFYNQLEETSVRHAILVPVTSQEITPALVRSWLNFHHFKQKISFKPGEN
IKLPKENDRKRSKNFR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgccattctagacatcgaagccactggcgggaaaaaggggactgaaaaaatc
attgatattgccatctaccaatttgatggtgaaaaggttaccgaccagtttgccagtatg
gtaaatcccgagcgtgagattgataaatttgttcagaacttgacgggtattacgcaaaaa
atggtacgccgagctcccaaatttcatgaacttgccaaaagaattgtggaaatcacaaaa
gattgtgtgattgtaggccacggcgtagatttcgactaccgaatgctgcggcaagaattt
caatctttgggttataattttgagcataaaactttagatacgctaacactcagtcatcaa
tttttgcccaatctcgaaacttattctttgggtaaactatgcaaaaacctgggcatcccc
ttggcggataggcatcgtgccgctggggatacgcgagcaactctagaattatttaaaatt
ttactcaaaaaagataaaaccaaaaatatcatcaaagcctttgggcaaaatgacccgaag
agcaaacagcagatttctaaattgctccaattacagagaaacctgccaacgcagagtggc
atctactattacctagatgccgatggcaaaattttttacctgcaagctgcaagaaatatt
caaaggtctgtaaaccaagattttacaaacacaagcaaaaagagcttacacatccaaaca
cgcgtgaaggaggttcattttgaaattactggaagtttttttatcgcccttcttatgcaa
atggaagaagaaatcaatcatcaaaatttaatcaaaaacaagcaaaattattttaaattt
ggattatttttaaacccaacaagaatagaaaaattaaataccaccgagggtatccctttt
ctgattttcccaacaaaaaacaaggcttataaagctttagactcatgcgagacgacggaa
gaaaatttgggaaataatgaagaaatttctcaaggcttaaaaaatatcacttctaatgaa
aatcattttatcctcatcgacaaaggccgaactgcggaagagaaatccttcatcgagatt
gaaaaaaatgaaattctaggtttcggattttttaaattttacaaccaattggaggagacc
tccgttcggcatgctatcttagtccctgtgacatcacaagaaataacgccagcattggta
cgcagttggctaaattttcatcatttcaaacaaaaaataagtttcaaaccaggcgaaaac
attaaattaccaaaagaaaatgacagaaaaagatcaaagaatttcagataa
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