Candidatus Ornithobacterium hominis: MSHRCOH1_03210
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Entry
MSHRCOH1_03210 CDS
T09176
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ohm
Candidatus Ornithobacterium hominis
Pathway
ohm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSHRCOH1_03210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ohm03019
]
MSHRCOH1_03210
03016 Transfer RNA biogenesis [BR:
ohm03016
]
MSHRCOH1_03210
Enzymes [BR:
ohm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MSHRCOH1_03210
Messenger RNA biogenesis [BR:
ohm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MSHRCOH1_03210
Transfer RNA biogenesis [BR:
ohm03016
]
Prokaryotic type
tRNA degradation factors
MSHRCOH1_03210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
PCB_OB
KH-I_KHDC4-BBP
Oxygenase-NA
KH_Vigilin
KH_2
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
CAI9429197
LinkDB
All DBs
Position
1:complement(707222..709357)
Genome browser
AA seq
711 aa
AA seq
DB search
MNYIEQTEEIRLNDGRSITLETGKLAKQADGSVVVKMGGTMLLATVVGAKEAREGVDFMP
LTVEYREKFTAAGKIPGGFIKREGRPSDDEILTMRLVDRVLRPLFPDDYHAEVQVIINVL
SYDASVLPDSLAGLAASTALALTDIPFKNPISEVRVVRVNGALSINPDLETLKKADLDIM
VGASKDSVVMVEGEMAEVSEQEMLEAIKFAHEAIKDQIEAQERLAEKVGKSFPKRTYCHE
VNDEKLEREIKEQLYQELYDIAKEPSEKHERSEKFDKALKNWKEKYSEEELTEIEPLIDK
YFGKVKKNAVRQMLLNEGVRLDGRSPQEIRPIWCEVDYLPATHGSSVFTRGETQSLSVVT
LGSSLDVDRIDSIIEEYDKKFYLHYNFPPFSTGEARPIRGTSRREIGHGNLAERALKRMI
PADNPYTIRLVSDILESNGSSSMATVCAGTLALMDAGIKIQKPVSGIAMGLITDQESGKW
TVLSDILGDEDHLGDMDFKVTGTKDGITACQMDIKISGLSYEILEKALMQAKDGRLHIMD
KMLETIAEPNPQLKPNAPKLVTLMIKSDFIGAVIGPGGKIIQEIQANTNTEISIDEKDNM
GIVEISGKDQAGIDEAIRRVKEITFEPEIGETYTGKVISIKPFGAFVELKRGTEGLVHIS
ELEWHRVNNVEDVVNIGDIIEVKYLENDKKTGKMRLSRKVLLPKPEKKNEE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaattatatagaacaaacagaagaaatccgtttaaatgacgggcgttccatcacctta
gagacgggtaaattggctaaacaggccgatggatctgtggtggtgaagatgggtggtacc
atgttacttgctactgtggtgggtgcaaaagaagctagagagggtgttgactttatgcct
ttgactgtggaatatagagagaaatttacagctgcgggtaaaatcccaggggggttcatc
aaaagagaagggcgcccaagcgatgatgaaatcttgacaatgcgcttggtagaccgtgtt
ttgcgtccgcttttccctgatgattaccatgcagaggttcaggtgattatcaatgtttta
tcttacgatgctagtgttttgcctgattctttggctgggctcgcggcttctactgcattg
gctttgactgatattccttttaagaatccgatttctgaagttcgcgtggtgcgtgtaaat
ggggcgctatccatcaaccccgatttagaaactctgaaaaaagcagatttagacatcatg
gtgggagcttctaaggattctgtggtgatggtagaaggtgaaatggctgaggtctctgag
caggaaatgcttgaggctattaagtttgcccacgaagccatcaaagaccaaatcgaagca
caggaacgcttggctgaaaaagtagggaaatctttccctaaacgcacttactgccatgaa
gtgaatgatgaaaagcttgaaagagaaatcaaagaacagctttaccaagagctttatgat
attgcaaaagaaccgagtgaaaagcatgaaagatcagaaaaatttgataaggctttaaaa
aattggaaagaaaaatatagtgaagaggagctgaccgaaatcgaaccgttgattgataaa
tactttggtaaagttaaaaagaatgccgttcgccaaatgttgctcaacgaaggggtgcgc
ttggatgggaggtctccgcaagagattcgcccaatttggtgcgaggttgattatttacca
gctacgcatggttcttctgtctttacgcgcggggaaactcaatctctgagcgtggtgact
ttaggctcatcgctggacgttgaccgcattgatagcatcatcgaagagtatgataaaaaa
ttctatttgcattacaatttccctccgttctctacgggcgaagctagaccaatccgtgga
acttcaagacgagaaatcgggcacgggaatttggctgagcgtgcattgaagcgaatgatt
cctgcggataatccgtacaccattcgtttggtttctgatattttagaatctaatggctca
tcttctatggctaccgtttgtgctgggactttggcgctgatggatgcaggtatcaaaatt
caaaagcctgtctctggaattgccatggggttgattactgaccaagaaagtggaaaatgg
actgtcttgtctgacatcttgggtgatgaagaccacttgggcgatatggactttaaggta
acaggaacaaaagatggcatcacggcttgccagatggatattaaaatatctggtctatct
tacgaaattctagaaaaagcactgatgcaagcgaaagatggccgccttcatattatggat
aaaatgctggaaaccattgctgaaccaaatcctcaattaaaaccaaacgctcctaaatta
gtgactttgatgataaaaagtgactttattggcgccgtgattggcccaggcggaaaaatc
attcaagaaattcaagctaatacaaatactgaaatttctatcgatgagaaagacaatatg
ggaatcgtagaaatcagcgggaaagaccaagctggcatagatgaagccattcggcgagtt
aaagaaattacctttgaacctgaaattggtgaaacttacacaggcaaagtgatttccatc
aaaccttttggcgcttttgtggagctgaaaagaggtaccgaggggctcgttcatatctct
gagctggagtggcatcgtgtgaataatgtggaagatgtggtgaacattggtgacattatt
gaagtaaaatacctcgaaaacgacaagaaaactgggaaaatgagattaagccgaaaggtt
ctgctcccaaaaccagagaagaaaaatgaagaataa
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