Candidatus Ornithobacterium hominis: MSHRCOH1_04105
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Entry
MSHRCOH1_04105 CDS
T09176
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ohm
Candidatus Ornithobacterium hominis
Pathway
ohm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MSHRCOH1_04105 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ohm01007
]
MSHRCOH1_04105 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ohm03016
]
MSHRCOH1_04105 (lysS)
Enzymes [BR:
ohm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
MSHRCOH1_04105 (lysS)
Amino acid related enzymes [BR:
ohm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MSHRCOH1_04105 (lysS)
Transfer RNA biogenesis [BR:
ohm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MSHRCOH1_04105 (lysS)
Prokaryotic type
Other AARSs
MSHRCOH1_04105 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
TrmB
Motif
Other DBs
NCBI-ProteinID:
CAI9429375
LinkDB
All DBs
Position
1:874149..875837
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AA seq
562 aa
AA seq
DB search
MTLSEQEQIRRDKLNEIKALGINPYPAEAYEVKDTTQSIEENFEEGKKVSLAGRLMARRI
QGKASFAELQDAAGRIQIYFNRDEICPGEDKNKYNELYKRLLDIGDFIGIEGQLFTTQVG
EKTVMVKDFTLLSKSLKPLPLPKTDSEGNIHDGFTDAEMRYRQRYADLAVNPHVKEIFYK
RSKLFTAMRNFFNDRGYFEVETPILQPIPGGAAARPFITQHNALNIPLYMRIANELYLKR
LIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYHWMMEFTEQLLEHCAREVN
GTTKAIFNGQEIDFKAPYPRITMRDAILEHTGFDIKDKTEEELRKAAKNMNLAVDETMGK
GKLIDEIFGEKCENQYVQPTFIIDYPKEMSPLTKMHRSEEGVTERFELMVCGKEIANAYS
ELNDPIDQRERFEEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGMDRLIMFLTD
QQSIQEVLFFPQMKPEKKKMELTEDEKNLLVLLETTEAYALEEIREKSGLSNKKWDKITK
SLRKKELINIEKTDEGLIIQKA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgacattatctgaacaagaacaaatccgtagagataaattaaacgaaattaaagccttg
ggtatcaacccttacccagcagaggcttatgaggtgaaagatacgactcaaagtattgaa
gaaaactttgaagaaggaaagaaagttagcttagctgggcgattgatggcaaggcgtatt
caaggcaaagcttcttttgctgaattgcaagatgctgcagggcgaattcaaatttatttt
aaccgtgatgaaatttgcccaggagaggataaaaataaatacaacgaactttataaaaga
cttctggatattggcgattttataggtatagaagggcaactctttacaacccaagttggc
gaaaaaacggtgatggtaaaagattttacactactgagtaagtcgctgaaacctctgcct
ttgcctaagactgatagcgaagggaatatacatgatggctttactgatgctgagatgcgt
taccgccagcgttatgcggatttggctgtcaacccgcacgtaaaagaaattttctataaa
aggagtaagctgtttacagcgatgcgtaatttctttaatgacagaggttattttgaggtt
gaaacaccgattttgcaaccgattcctggcggggctgcggcgcgaccttttatcacgcaa
cataatgcactgaatattcctctgtatatgagaattgctaatgaattgtacctcaagcgt
ttgattgtaggtggatttgatggtgtgtatgaattttctaaaaactttagaaatgaggga
atggatcgtacgcacaacccagagtttacagcgatggaaatttatgtggcgtacaaagat
tatcattggatgatggagtttacagagcaattgctagagcactgtgcacgagaggttaac
ggaacgacgaaagcaatatttaacgggcaagaaattgatttcaaggcgccttatccgcgc
atcactatgcgagatgcaattttagaacacacgggatttgatattaaagataaaacagag
gaggaattgcgaaaggctgctaaaaatatgaatttggcagtagatgaaacaatggggaaa
ggaaagcttattgatgaaattttcggtgaaaaatgtgaaaatcaatatgttcagcctact
tttattattgattatcctaaagaaatgagcccgctgaccaagatgcaccgtagtgaagaa
ggcgtcacagaacgatttgaattaatggtttgtgggaaagaaatcgctaatgcttattct
gagttgaatgacccgatagatcaacgcgagcgatttgaagagcaattgaaattgagcgaa
aaaggtgatgacgaagccatgttcatcgaccaagattttttacgagccttggagtatggc
atgccgccgacggctggtctaggcatcgggatggatagattgattatgtttttgaccgac
caacaatccatacaagaagttttatttttccctcaaatgaaacccgagaagaaaaagatg
gaattgacggaagatgaaaagaatttactcgtcttgctagaaactactgaagcttatgct
ctagaagaaatcagagaaaagagtggtttgtctaacaaaaaatgggataaaatcacaaaa
tcattgcgcaaaaaggaactcatcaacatcgagaaaacagatgaaggattaatcattcaa
aaagcgtaa
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