Candidatus Ornithobacterium hominis: MSHRCOH1_04480
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Entry
MSHRCOH1_04480 CDS
T09176
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ohm
Candidatus Ornithobacterium hominis
Pathway
ohm03030
DNA replication
ohm03430
Mismatch repair
ohm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSHRCOH1_04480 (dnaX)
03430 Mismatch repair
MSHRCOH1_04480 (dnaX)
03440 Homologous recombination
MSHRCOH1_04480 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ohm03032
]
MSHRCOH1_04480 (dnaX)
03400 DNA repair and recombination proteins [BR:
ohm03400
]
MSHRCOH1_04480 (dnaX)
Enzymes [BR:
ohm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSHRCOH1_04480 (dnaX)
DNA replication proteins [BR:
ohm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSHRCOH1_04480 (dnaX)
DNA repair and recombination proteins [BR:
ohm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSHRCOH1_04480 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
Rad17
AAA_14
RCF1-5-like_lid
AAA_5
AAA_30
AAA_7
TIP49
nSTAND3
RNA_helicase
AAA_18
Mg_chelatase
AAA_16
AAA_19
DNA_pol3_delta_C
AAA_assoc_2
AAA_24
NPHP3_N
DUF815
DEXQc_Suv3
AAA_2
GNAT_acetyltr_2
Sigma54_activ_2
NACHT
DUF5906
TsaE
AAA_33
Motif
Other DBs
NCBI-ProteinID:
CAI9429448
LinkDB
All DBs
Position
1:945829..946923
Genome browser
AA seq
364 aa
AA seq
DB search
MDNYVVSARKYRPQTFDEVVGQEVIAKTLEHAIENNHLAQALLFCGPRGVGKTTCARILA
RKINESATDDSKDSDFTFNIFELDAASNNSVDDIRSLVDQVRFPPQVGQYKVYIIDEVHM
LSNQAFNAFLKTLEEPPAHAIFILATTEKHKIIPTILSRCQIYDFKRISIIDIKNHLKKI
AAQENIEYEDDALHLIAQKADGALRDALSIFDRLVTFGNGNVSMQVVTETLNVLDYETYF
SVTQHLIGNEIPKVLLQLEEILQKGFDAQLFISGLGSHLRDLLVAKHAETQSLLDVGEKT
AQKYLKQAQICNLNFLLQGIEICNKADIDYKNSKNQRLTVELALMQLASLTAEDNTIFKK
KSLE
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggataattacgttgtttcagctagaaaatacagaccccaaacttttgatgaagtcgtt
ggtcaggaggtaattgcaaagactttagagcatgcgattgagaataatcatttagctcaa
gctttgttattttgcgggccaaggggtgtgggaaaaacaacttgtgcaaggattttagcc
cgaaaaattaatgaatctgccactgatgacagcaaagattctgattttacattcaatatt
tttgaattggatgcagcttctaataactccgtagatgacattcgctcgctggttgaccaa
gtgcgttttccgccacaggtggggcaatacaaagtttacataatagatgaagttcatatg
ttatctaatcaagcatttaatgcttttttgaaaactctagaggaaccaccagcgcatgct
atttttattttagcaacaacagaaaaacacaaaattatcccgacgattttatctcgatgc
caaatttatgattttaagagaattagcattattgacatcaagaatcacttgaagaaaatt
gctgctcaagaaaatattgaatatgaagatgatgcactgcatttaatcgctcaaaaagca
gatggagctttgcgtgatgcgctttcaatttttgaccgtttagtgacttttggcaacgga
aatgtttcgatgcaagtggtgactgagactttgaatgtattggattacgaaacttatttc
tctgtaacacaacatttaatcggaaatgaaatcccaaaagttttgctccaattggaagaa
attttacagaaaggttttgatgctcaattatttatcagcggattgggaagccatctaaga
gatttgctcgtagctaaacatgctgagacgcaatcgctattggatgtgggtgagaaaaca
gctcaaaagtatttgaaacaagctcaaatttgtaatttaaattttctattgcaaggtatt
gaaatttgtaataaagctgatattgattataaaaactctaaaaatcaaagacttacagtt
gagttagctttaatgcaattagcgagtttgacggcagaggataatacaatctttaaaaaa
aaaagtttagaataa
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