Candidatus Ornithobacterium hominis: MSHRCOH1_04870
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Entry
MSHRCOH1_04870 CDS
T09176
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ohm
Candidatus Ornithobacterium hominis
Pathway
ohm00260
Glycine, serine and threonine metabolism
ohm00460
Cyanoamino acid metabolism
ohm00630
Glyoxylate and dicarboxylate metabolism
ohm00670
One carbon pool by folate
ohm00680
Methane metabolism
ohm01100
Metabolic pathways
ohm01110
Biosynthesis of secondary metabolites
ohm01120
Microbial metabolism in diverse environments
ohm01200
Carbon metabolism
ohm01230
Biosynthesis of amino acids
ohm01240
Biosynthesis of cofactors
ohm04981
Folate transport and metabolism
Module
ohm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MSHRCOH1_04870
09102 Energy metabolism
00680 Methane metabolism
MSHRCOH1_04870
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MSHRCOH1_04870
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MSHRCOH1_04870
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MSHRCOH1_04870
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MSHRCOH1_04870
Enzymes [BR:
ohm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MSHRCOH1_04870
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CAI9429524
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Position
1:complement(1024012..1025274)
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AA seq
420 aa
AA seq
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MDKIFDLIQKEKERQTNGIELIASENYVSDDVLRALGSVLTNKYAEGYPGKRYYGGCEVI
DEVEQLAIDRLKELFGAEYANVQPHSGSQANAAVYLACLAAGDKILGLDLSHGGHLTHGS
PVNFSGIRFENYFYGLDKETGLIDYDAMEAKAKEVKPKMIICGASAYSRDIDYERFRKVA
DEVGAVLMADIAHPAGLIAKGLLNNPMPHCHIVTSTTHKTLRGPRGGIIMLGNDFENPFG
KKRAGKPKMMSELLNSAVFPGNQGGPLENVIAAKAIAFGEGLSPAFKTYGENVIKNSKKL
AEHLMEMGYEIVSGGTENHCMLIDLRNKNVNGKIAEKALVDADITCNKNMVPFDTESPFI
TSGIRLGSAAVTTRGLKENDMETIANFINKVIENHDNEQVIKEVRADVNDLMKSKPLFQM
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatttttgatttaattcaaaaggaaaaagagaggcaaacgaatggtatagaa
ctgattgcatcagaaaactatgtgagcgatgatgtgctgagggctttgggttctgtgctg
acgaataaatatgcggagggctaccctgggaagcgctactatggcggctgtgaggttata
gacgaagtagagcaactcgcgatcgaccgcctgaaggaactttttggtgcagaatatgcg
aatgtacagccgcattctggttcgcaagccaatgcggcagtttatttagcttgtttagct
gcgggagataagattttaggtttagatttatctcacggggggcatttgactcacggttca
cccgtgaatttttcaggcattcggtttgagaattatttctatgggctagataaagaaact
ggcttgatagattatgatgcgatggaagctaaagctaaagaagtgaaaccaaaaatgatt
atttgcggggcatcggcatattctcgagacattgactatgagagatttagaaaagtagct
gatgaggtaggagctgtgctgatggcagatattgcacacccagcggggctgattgccaag
ggattactcaataacccaatgccacactgccatattgtaacttctaccacgcataaaact
ttacgcgggccacggggaggaatcatcatgctagggaatgattttgaaaatccatttggc
aagaaaagagcagggaaacctaaaatgatgtctgaattactgaattcagctgttttccca
ggaaatcaaggcggcccattagaaaatgtgattgccgcaaaagccattgcctttggcgaa
ggcttgagcccagcatttaaaacctatggtgaaaatgtcatcaaaaattctaaaaaatta
gcagagcatttgatggaaatgggctatgaaatcgtatctggcggaacggaaaatcactgt
atgctgattgacttgagaaataaaaacgtgaacgggaaaatagccgagaaagccttggta
gatgctgacattacgtgcaataaaaatatggttccgtttgataccgagtcgccgttcatc
accagtggaattcgcttgggttcggccgccgtgacaactcgtggactgaaagaaaatgat
atggaaacgattgctaatttcattaacaaagtgattgaaaatcatgataatgagcaggta
ataaaagaagtccgcgccgatgtaaatgacttgatgaagagtaaaccactattccaaatg
tga
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