Candidatus Ornithobacterium hominis: MSHRCOH1_05365
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Entry
MSHRCOH1_05365 CDS
T09176
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ohm
Candidatus Ornithobacterium hominis
Pathway
ohm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MSHRCOH1_05365 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ohm02000
]
MSHRCOH1_05365 (msbA)
Transporters [BR:
ohm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MSHRCOH1_05365 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
RsgA_GTPase
MMR_HSR1
SMC_N
DUF5906
AAA_22
DUF87
AAA_15
AAA_29
Zeta_toxin
HAMP
AAA_18
AAA_21
AAA_30
AAA_28
Dynamin_N
FtsK_SpoIIIE
AAA_23
Motif
Other DBs
NCBI-ProteinID:
CAI9429621
LinkDB
All DBs
Position
1:complement(1137039..1138796)
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AA seq
585 aa
AA seq
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MGKDKNRFNFSELKRLFYLGVENKRLFIAVILIAVFLSAVSSIRPLLTGKAIDQFILPKE
PALLLQLCVWLGLILLAEIILQYIFILFSNIVAQDVIEKLRVNLFNKIINYRLAFFDKTP
NGRLVTRSVSDIETISQVFTDGILVVLGDLLRIFFIMGTMFYTNWKLALVVIVILPLMVI
ITRIFQRSIKKTFTAERNQTSAFNSFVQERLSGMNIIQLFNREDSEYQKFTEINQDLRKA
YLATIFYFSLLFPIVELVSAFALGLVVILGGFSAFYYSDVTPGEVIAFIIFIPMLVRPIR
QMAERFNNLQRGLVSSERVFKMIDLDDSIPDLGKIEKNNIRGSIEFKNVVFEYVENQEVL
KNISFLANPGDTIAIVGATGAGKSTIINLLSRFYDIKSGNILIDDIDIRDYRLENLRSHI
AVVLQDVFLFNESILENITLGNPEITREQVVQAAKEIEIHDFIESLPGGYDFVVSERGST
LSVGQRQLISFLRAYVYNPKILVLDEATSSIDTNSENLIQQATKRITKERTSIVIAHRLA
TIKEATQILVMRAGKIVERGKHKELLEKKGYYAELYEAQFQNTNS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggataaaaatagatttaatttttctgaacttaagcgactattttatttaggt
gtagaaaataagagattatttattgctgttatattgatcgcagtttttttatcggcagta
tcttccatccgtccattactcacggggaaagctatagaccaatttattctccccaaagaa
cccgctttgcttttgcaactttgcgtatggctgggcttgattcttttggcagaaatcata
ttacagtatatttttattttattctccaatattgtagcacaagatgtgattgaaaaatta
cgtgtcaatttatttaataaaatcattaactaccgattggctttttttgataaaacgcct
aacggaaggttggtaactcgttcagtatcagacatagagacgataagtcaggtttttacc
gatgggattttggtcgtgttgggcgatttattacggatttttttcatcatgggtacgatg
ttctataccaactggaaactggcgttggtggtgattgttattttaccgcttatggttata
attactcgaatttttcaacgttctatcaaaaaaacattcacagctgaaagaaatcaaaca
tcggcttttaacagctttgtgcaagaaaggctttcaggaatgaatattattcaacttttt
aaccgagaagattcagagtatcaaaagtttactgaaattaatcaagatttgagaaaagcc
tatttagctacgattttttatttctcattgctattcccgattgtagaattggtatctgca
tttgctttaggcttggtagtcattctaggtgggtttagtgctttttattacagcgatgta
actccaggagaagtaatagcttttatcatttttattccaatgttggtacgcccgattcgc
cagatggcagaacgatttaataatttacagcgtggtttggtgagttcagaaagagtgttt
aaaatgatagatttagatgatagtattcctgatttggggaaaatcgaaaaaaataacatt
cgtggttctattgagtttaaaaatgttgtttttgaatacgttgaaaatcaagaagttctg
aaaaacattagtttcttagctaatccaggagatacgatagccattgtgggtgccacagga
gcaggaaaatctacgattattaatttactgagtcgattttatgatattaaaagcgggaat
attttaatagatgatattgatattcgggattatagattagaaaatctccgctctcacatt
gccgtagttttgcaagatgtttttctattcaacgaatccattttagaaaatattacactg
gggaaccctgaaatcactcgagaacaagtcgttcaagcagctaaagaaattgagattcat
gactttatagaaagtttgcctggtgggtacgattttgtagtttctgagcgaggcagcaca
ttatcggtagggcaacggcaactgatttcatttttgagagcttatgtctataatcccaaa
atcttagtattagacgaggctacaagcagtatagataccaattctgaaaatttaattcaa
caagcgaccaaaagaattaccaaagaacgcacaagcatcgtcatagcacatcgtttagcg
accatcaaagaagcgactcaaattttagtcatgcgtgctgggaaaatcgttgaaagagga
aaacacaaagaattgctagaaaaaaaaggctactatgctgaattgtacgaagctcaattc
caaaatacaaattcgtaa
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