Candidatus Ornithobacterium hominis: MSHRCOH1_05570
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Entry
MSHRCOH1_05570 CDS
T09176
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ohm
Candidatus Ornithobacterium hominis
Pathway
ohm00541
Biosynthesis of various nucleotide sugars
ohm01100
Metabolic pathways
ohm01250
Biosynthesis of nucleotide sugars
Module
ohm_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MSHRCOH1_05570 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ohm01005
]
MSHRCOH1_05570 (kdsA)
Enzymes [BR:
ohm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
MSHRCOH1_05570 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
ohm01005
]
Lipid A
MSHRCOH1_05570 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
CAI9429662
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Position
1:complement(1185859..1186674)
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AA seq
271 aa
AA seq
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MIQSLDKIKNKNSEQFFLIAGPCAIENEDTPRRIAEKIVELTDRYRIPYIFKGSFRKANR
SRLDSFMGIGDEKALNILKKIGEEFDIPVTTDIHECSEATLAADYVDVLQIPAFLVRQTD
LVVAAAQTGKVVTLKKGQFLSPEAMKFPVEKVKESGNEKVAIIERGTTFGYQDLVVDFRG
IPVMNRFAPVILDVTHSLQQPNQKSGVTGGKPELIETLAKAGIATGAEGIFIETHPEPQN
AKSDGANMLPLSKLDDLLAKLTKIREVIDSI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgattcaatctttagacaaaatcaaaaataagaattccgagcaatttttcctcattgca
gggccttgtgccattgaaaatgaagatacgccccgtcgtattgcagagaaaattgtggag
ttgacagatagatatagaattccttatatttttaagggttcttttagaaaagccaaccgt
tctaggttagattccttcatgggaattggtgatgaaaaggctttaaatattttaaaaaaa
ataggagaagagtttgatattcctgtgacgacagatattcacgaatgctcggaagcgact
ttagcggctgattatgtggatgttttgcagattccagcttttctagttcggcaaacagat
ttggtggtggctgctgcacaaacagggaaagtcgttacgctaaaaaaaggtcaatttttg
tctccagaggcaatgaaatttcctgtggagaaagtaaaagaaagtgggaatgaaaaagtg
gcaatcattgagcgaggaaccacatttggttatcaggatttggtagtagactttagagga
attcctgtgatgaataggtttgcacctgtgattttggacgtgacgcattcactccagcaa
ccaaatcaaaaatcgggtgtgactggaggaaaaccagagttgatagaaactttggcaaaa
gcaggtatagcgactggagctgagggaatctttattgaaacgcaccctgagcctcaaaat
gctaaatcagatggagctaatatgttgccacttagtaaattagatgatttgttggcaaaa
ttaactaaaattagagaagtcattgattctatttaa
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