Candidatus Ornithobacterium hominis: MSHRCOH1_06015
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Entry
MSHRCOH1_06015 CDS
T09176
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ohm
Candidatus Ornithobacterium hominis
Pathway
ohm03030
DNA replication
ohm03430
Mismatch repair
ohm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSHRCOH1_06015 (dnaE)
03430 Mismatch repair
MSHRCOH1_06015 (dnaE)
03440 Homologous recombination
MSHRCOH1_06015 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ohm03032
]
MSHRCOH1_06015 (dnaE)
03400 DNA repair and recombination proteins [BR:
ohm03400
]
MSHRCOH1_06015 (dnaE)
Enzymes [BR:
ohm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSHRCOH1_06015 (dnaE)
DNA replication proteins [BR:
ohm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSHRCOH1_06015 (dnaE)
DNA repair and recombination proteins [BR:
ohm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSHRCOH1_06015 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
CAI9429749
LinkDB
All DBs
Position
1:1266508..1270830
Genome browser
AA seq
1440 aa
AA seq
DB search
MYYLIYDTETTGIPANFDAPLSDSDNWPRLVQLAWQLHNEKGELIENHNLIVKPDGFDIP
FNAIQIHGITNEIAHEKGLALSVVLQKFFGSFDLENTLIIGHNIQFDISIVGAEMHREGM
DFEKLTAAPTLDTARASTEYCALPGGRGGKFKFPKLGELHQRLFGHFFDEAHNAAADVNA
TARSFFELVRLGVISSAQARFSAENFKAFKNLFPSVIAPYPIDVGQQIAEKEAALAWAES
QKIKDKNEVEIVKNSPYFHFHNHSSFSILSATTTVENLIKKAVELEMPAVGITDMGNLMG
AFHFVQAIRDKKDVITPIIGCEVYVSERYRQHKFTKDNPDRRHTQVLLAKNKAGYHNLSK
ISSIGYIDGYYAGFPRVSKEVILKYKENLIATTGSISSEIPDIILNVGEKNAEEAFLWWK
EHFGEDFYVELIRHGLPEENHVNEILIKFARKYNVKILAQNNTYYINQSDAKAHDILLCV
RDGEKVDTPIGRGRGYRFGFPNDEFYFKTASQMEHLFEDIPEAIQNLKDFVKKFEFYDLK
QDVLLPKFKIPKEFEVEEDLQDDGVRGENAYLKHLTYEGAKKRYGIITEEIQNRLDFELE
TIANTGYPGYFLIVQDFTSQARKMGVSVGPGRGSAAGSAVAYCIGITNIDPIKYDLLFER
FLNPERVSLPDIDIDFDDRGRDEIIRWVINKYGKDQVAQIITYGTMAGKSAIRDTARVLD
LPLADSNKIAKKVHTKLNKLFKMDDKSLSEKFNGDELKDLQDILEISKRDDLEATTIQQA
KVIEGSIRNTGVHACGVIITPKDIKELIPVAIAKDSDMAVTQFDNSVVENAGLLKMDFLG
LKTLSIIKDAVNLVKKTKEIELIPDDFPLEDPLTYQEIFQKGKTVGIFQYESPGMQKHLK
DLKPDKFDDLIAMNALYRPGPLAYIPNFIDRKHGIEEISYDLPEMEEYLAETYGITVYQE
QVMLLSQKLANFTKGEADVLRKAMGKKQMDTLAKMEGKFIQNAIGNGHPENVLKKIWEDW
KAFAQYAFNKSHSTCYAYVAFQTAYLKAHHPAEFMAAVLSNNMKDIKEITNFMQECKRMD
VPVLSPDVNESSYDFTVNKNGAVRFGLGAIKGVGSAAVESIIQERNENGKFTNVFDFIER
IDQRVCNKKTLENLIYAGAFDELDQYHRAQYFFEDHEGVTNLEKIIKYGNAASDEGNENQ
ISLFDVADMEVEMQKPMILDCPAWPIMYQLNKEKEVVGIYISSHPLDRFQVELNHYKNID
LITLKERQKEMIDKTFTVGGLVTEVQHLVSAKNGKEFGKFILEDYTDSFEFMLFGEEYLR
LRHFLEPNQFVLLQLHVNENKFSKRIYTNIKSIDLLDDLIEKRAKSIEFHFEINEINEEL
IKNLLKIIQNNGGDKNLFLNLRDEKTQNVFASQSRKFSISITKDLIDELKRYEIDNYKLN
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgtactacctcatttacgatacagaaaccacagggattcctgcaaattttgacgcacca
ctctctgatagtgataattggccacgtttagttcagctggcttggcagctccacaacgag
aaaggcgaattgattgaaaatcataatttgattgtaaaacctgatggttttgatattccc
ttcaatgcgattcaaattcacgggattaccaatgagattgctcacgagaaggggctggct
cttagtgtcgttctacagaaatttttcggcagttttgatttagaaaacacacttatcatt
gggcacaacattcaatttgatatttctatcgtaggagcagaaatgcaccgtgaaggcatg
gattttgagaagttgacggctgctcccacgctagacacggcgagagcctctactgagtat
tgtgccctacctggcgggcggggcgggaagtttaaattccccaaattgggagaacttcac
cagcggttatttggccatttctttgatgaggcacataatgccgcagcggatgttaatgcc
acagctcgtagcttttttgaattagtaaggctcggcgtcatttcttctgcacaagcacgt
ttttcggcagaaaattttaaagcctttaaaaatttatttccttccgttatagccccctat
cctatcgatgtcgggcaacaaattgcagaaaaggaagctgccctagcctgggctgagagc
caaaaaataaaagataaaaatgaagttgaaattgtgaaaaattcaccatattttcacttt
cataatcatagttcattctctattctttcggcaactacgactgttgagaacctcatcaaa
aaagctgtagaactagaaatgcctgctgtgggaattaccgatatgggaaatcttatggga
gctttccattttgtgcaggcaataagggataaaaaggatgtaataacgccaattattggc
tgtgaagtttacgtaagtgaacgctatcgacagcataaatttaccaaagataaccccgac
cgcaggcatacgcaggttttattggcaaagaacaaggcgggttatcataatttgagtaaa
atttcatctatcggctacattgatggttactatgcagggtttccccgagtgagcaaggaa
gttatcttaaagtataaagaaaatttaattgctacgacaggttctatttcttcggaaatt
cctgacattattctgaacgtgggtgaaaaaaatgctgaggaagctttcctttggtggaaa
gagcattttggcgaagatttttatgtggaattaattcgccatggtttgccagaggagaat
catgtgaatgaaattctcatcaagtttgctagaaaatacaacgtcaagattttggcgcaa
aataatacttactacatcaatcaatcagatgctaaagcgcatgatattttactgtgcgta
cgtgatggggagaaagttgatacgcccatcgggcgtgggcgcggctaccgttttggcttc
cctaatgatgagttttacttcaaaacagcctcgcagatggaacatctctttgaagatatt
cctgaagccattcagaatttaaaggattttgtgaaaaaatttgaattttatgatttaaaa
caagacgttttacttcctaaatttaaaatcccaaaggagtttgaagtagaagaagatttg
caagatgatggcgtgaggggcgagaatgcttacctaaagcacttgacttatgaaggggca
aaaaaacgctacggaatcattactgaagaaatccaaaatcgattggactttgaattagaa
acgattgcaaacacgggctatcctggctattttttaattgttcaggatttcacttcacaa
gctaggaaaatgggggtttctgtaggcccagggcgtggttctgcggctggttctgcggtg
gcgtattgcatcgggattactaatatagaccccatcaaatatgatttgctttttgagcga
ttcttaaaccccgagcgtgtttctttgcccgatattgatattgattttgatgaccgcggg
cgagatgagatcatccgttgggtgattaataaatatggtaaagaccaagttgcgcaaatc
attacttacggcactatggcagggaaatccgccatacgagacaccgcaagagttttagat
ttaccgctggctgatagcaataaaattgcgaaaaaagtacatacaaaattgaataagctg
tttaaaatggatgataaatctctcagtgaaaaattcaatggagatgaactgaaggattta
caagatattctagaaatttctaaaagagacgacctagaagcaacaaccatacagcaagca
aaggtaatagaaggtagcataagaaacacaggtgtgcacgcctgcggagttattatcacc
cccaaggatattaaggaactgatacctgtagctatagctaaagatagcgatatggcggta
acgcagtttgataattctgtggtagaaaacgctggattactaaaaatggattttttaggg
cttaagactttgagtataatcaaagatgctgtgaatttagtgaaaaaaacaaaagaaata
gaactcatcccagatgatttccccttggaagaccccttgacttatcaagaaatatttcag
aaagggaaaaccgttggtatattccaatacgaatcccctggaatgcaaaaacatcttaaa
gatttaaagccagataaatttgatgatttgattgcgatgaatgcactttatcgccccggc
cccctcgcctacattcccaattttatcgaccgaaaacacgggatagaagaaatcagctat
gatttgcccgagatggaagaatatttagctgaaacttatggcattaccgtttatcaagag
caagtgatgttactttctcagaagttagcaaatttcaccaaaggagaagccgatgtgctg
agaaaagcaatgggaaaaaaacaaatggatactttggctaaaatggaaggtaaattcatt
caaaacgccataggcaacgggcacccagaaaatgttttaaaaaaaatatgggaagactgg
aaagctttcgctcaatatgcattcaacaaatctcactccacctgttacgcctacgtcgct
tttcaaaccgcttatttaaaagcacaccatccagccgagtttatggccgctgtgctaagc
aataatatgaaagacatcaaggaaataaccaacttcatgcaagaatgcaagcgaatggac
gtccccgtactgagccctgatgtgaatgagagttcatatgattttaccgtaaataaaaat
ggtgccgttcggtttggtctaggagccatcaaaggcgttggcagcgccgcagtagagagc
atcatacaagagagaaacgagaatgggaaatttactaatgtttttgatttcattgagcgg
atagaccagcgtgtatgcaataaaaaaactttagaaaatttaatttacgctggtgcattt
gatgagttagaccaataccaccgtgcacagtatttctttgaagatcatgaaggtgtaacc
aatctagagaaaatcatcaaatacggtaatgctgccagcgatgagggcaacgagaatcaa
atttcattatttgacgttgcagatatggaagtcgaaatgcagaaaccaatgattttagat
tgcccagcttggcccattatgtaccagctcaataaagaaaaagaagtggtgggaatttac
atctcttctcacccattagaccgctttcaagtagagctaaatcattacaaaaacattgat
ctgattacgctaaaagaaagacaaaaagaaatgattgataaaacattcaccgtaggtggg
ctggtaacagaagtgcaacatttggtttccgctaaaaatggaaaggaattcgggaaattt
atactggaagattacaccgatagctttgagtttatgctgtttggtgaagaatatctgcgc
ttgaggcacttcttagaacccaatcagtttgttctattacaacttcacgtgaacgaaaat
aaatttagcaaacgtatttacaccaacatcaaaagcattgatttgctagatgatttgata
gaaaaaagagctaagtccattgaatttcactttgaaattaatgaaattaatgaagagtta
atcaaaaatttactaaaaatcattcagaataacggaggagataaaaatttattcctaaac
ctaagagacgaaaaaacgcaaaacgtttttgcctcacaaagcagaaaatttagcattagc
attaccaaagatttaatcgatgagctaaagagatatgaaattgataattataaattaaat
tga
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integrated database retrieval system
