Candidatus Ornithobacterium hominis: MSHRCOH1_06675
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Entry
MSHRCOH1_06675 CDS
T09176
Symbol
lagD
Name
(GenBank) Lactococcin-G-processing and transport ATP-binding protein LagD
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
ohm
Candidatus Ornithobacterium hominis
Pathway
ohm02010
ABC transporters
ohm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MSHRCOH1_06675 (lagD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSHRCOH1_06675 (lagD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ohm01002
]
MSHRCOH1_06675 (lagD)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ohm02000
]
MSHRCOH1_06675 (lagD)
Peptidases and inhibitors [BR:
ohm01002
]
Cysteine peptidases
Family C39
MSHRCOH1_06675 (lagD)
Transporters [BR:
ohm02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
MSHRCOH1_06675 (lagD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_16
AAA
AAA_24
RsgA_GTPase
nSTAND3
DEAD
DUF4577
DUF87
AAA_23
NACHT
DLIC
AAA_25
NB-ARC
AAA_30
SbcC_Walker_B
SRP54
Sigma54_activat
Caps_synth_CapC
Motif
Other DBs
NCBI-ProteinID:
CAI9429878
LinkDB
All DBs
Position
1:1396113..1398272
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AA seq
719 aa
AA seq
DB search
MKRGTLIKQHDIKDCGAACLASVGAYYGNKMPIAKIRQICHTDTRGTNVLGMIQGLEAMG
FNAKGVKGDIEALSNIPLPAIAHIIVNGQLHHFVVIYKLSKGKVTVMDPAYGKLEEYSEE
DFTKIWTGVLVILEKNEYFEQKDERTSVYARFWNLVKPHKSILFQALLGAVIYTVLGLST
SIYIEKITDYVLIDGNRRLLNLLSIGMIIILLFQIFISSMKSILVLQTGQKMDKHLILGY
YKHLLKLPQRFFDTMRVGEIISRVNDAVKIRSFINDVAIQIFVNVFIVFFSFALMFTYYW
KLALIIALVIPFYLLVYWITNKLNKKVERQLMEEGADLEAHLVESLNSVRTIKQFGVETF
ANNKTDNTFSKLLKTIYKSVLNALFSGNSSEFLSRIFTIVLLWAGAGYVIDREITPGELL
SFYALIGYFTSPVAQLIGMNKTVQNALIAADRLFEIMDLEREETTDKLELTADGIGNIQF
KDVHFSYGSRVDVFEGFNCEIEKGKTTAIVGESGSGKTTLASLIQNLYSLKKGKIMIGNY
DIQYISNQSLRTMVSVVPQQIDLFSGNVIDNIALGEDIPNMQRIIDITKKLGILEFIEKL
PNGFQTYLGENGSQLSGGQKQRIAIARALYKNPEVLILDEATSALDTESEQIIQRTLDEF
KAQGKTMIVIAHRLSTIAHSDTILVMKEGKVIEQGSHKELLAKDSVYKRMWEKQSVSLS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaggcacactaataaaacagcatgatataaaggattgtggagcagcatgtttg
gcttctgttggggcttactatgggaataaaatgcctattgctaaaattcgacaaatatgc
catactgatactcgtggaacaaatgttttaggaatgattcagggcttagaagcaatgggc
tttaatgccaaaggagtcaagggagatatagaagcattgtcaaatattccattaccagcc
attgcacatattattgttaatggtcagttacatcattttgttgtgatttataaattaagt
aaggggaaagttacagtaatggaccctgcttatggtaagttagaagaatattcagaagaa
gattttactaaaatatggacaggagtattggtgattttagaaaaaaatgaatattttgaa
caaaaagatgagagaacaagtgtttatgctcgtttctggaatttagtaaaacctcacaag
agtatcttatttcaagcactattaggagcagttatttatactgttttagggctttctact
tctatttatattgaaaaaatcacagattatgttcttatagatggaaataggagattacta
aatcttctttccataggaatgataattattctattattccaaatatttataagttcaatg
aaatccatattggttctgcagacagggcaaaaaatggacaaacatttaattttgggctat
tataagcatttattaaagttgcctcaacgcttctttgatacgatgagagtaggagaaatt
atatctcgtgtaaatgatgctgttaagattagatcttttataaacgatgtagcaatccaa
atttttgtgaatgtattcattgtctttttttcttttgctttgatgttcacttattattgg
aagttggcattaattattgctttggttattccgttttaccttttagtttattggattact
aacaaattgaataagaaagtagaacgccaattaatggaagaaggagcagatttggaggct
catttggtggaatcgctaaactcggtaagaaccattaagcaatttggagtagagacattt
gctaataataaaaccgataatacattttcaaaactattaaaaacgatttataaatcggtg
ttaaatgccttattttcgggcaattcatcagagtttttatcaagaatatttacgattgtt
ttgctttgggcaggtgcagggtatgtgattgatagggaaatcaccccaggggaattatta
tcattttatgctttaataggctattttaccagtccagtggctcaacttataggaatgaat
aaaacagttcagaatgcattgattgccgcagaccgattatttgaaattatggatttggaa
agggaagaaacaacagataaactagaattgacagcggatggtataggaaatattcagttt
aaagatgttcattttagttatggcagcagagtagatgtatttgaaggtttcaattgtgaa
atagaaaaaggaaaaacaacagctattgttggtgagagtggttcaggtaaaacaacatta
gcttcactcatacagaacttatacagccttaaaaaagggaaaataatgataggaaattat
gacatacaatatatttctaatcaatcattaagaacaatggtttcggtggttcctcaacag
atagatttattttcaggaaatgtaattgataatattgcattgggagaggatattcctaac
atgcagaggataatagatattactaaaaaacttggaattttagaatttattgaaaaactg
cctaatggttttcagacatatttaggagaaaatggctctcagctttcaggaggacaaaaa
cagagaatagctatagcaagagctttatacaaaaacccagaagtcttgattttggatgag
gcaacatcagcattagatacagaatcagaacagattatacaaagaactttagacgagttt
aaagcacaaggaaaaacaatgattgttatagctcatagattaagcacaatagcccattct
gatactatattggtaatgaaagagggaaaagtaatagagcaaggaagtcataaagaacta
ttagcaaaagattctgtatacaaaagaatgtgggagaaacaaagtgtatcgttgagttaa
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