Candidatus Ornithobacterium hominis: MSHRCOH1_08805
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Entry
MSHRCOH1_08805 CDS
T09176
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ohm
Candidatus Ornithobacterium hominis
Pathway
ohm03420
Nucleotide excision repair
ohm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSHRCOH1_08805
03430 Mismatch repair
MSHRCOH1_08805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ohm03400
]
MSHRCOH1_08805
Enzymes [BR:
ohm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSHRCOH1_08805
DNA repair and recombination proteins [BR:
ohm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSHRCOH1_08805
MMR (mismatch excision repair)
Other MMR factors
MSHRCOH1_08805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
AAA_11
DEAD
DUF4883
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
CAI9430288
LinkDB
All DBs
Position
1:1847945..1850260
Genome browser
AA seq
771 aa
AA seq
DB search
MANYLDELNEVQKLAVQATQGPVMVIAGAGSGKTRVLTYRIAHLINNGVDAFNILALTFT
NKAAREMKERIAKVVGESEAKSIWMGTFHSVFARILRVEAPRLGYPSNFTIYDQQDALSV
MRKVIKDLQLDIDVYKPKTLLHRISQFKNNLITVRAYYNNPELMDADAAALKPKTGEVYQ
AYVERCFKSGAMDFDDLLLRTNEILTRFPEVLAKYQERFKYILVDEYQDTNHSQYLIVKA
LASRYENICVVGDDAQSIYAFRGANIRNILNFKKDYNDAQSFALEQNYRSTQNIVNAANN
IIKNNRDQLEKNVWTANQEGNKIPVYRALTDADEARYITSKIFELKMNENFQEEDFAILY
RTNAQSRALEEALRKKNIPYRIYGGISFFQRKEIKDLVSYLRLLVNKKDEEALLRIINYP
KRGIGDSTIQKLLVYADEHHLSLFEVMENLNQHGPYLGVSSGVIKKLHDFTTMIQSFGVL
LKNNNIYDLGLQIAKQSGLLNTLREDETPEGITRMENLQELLNSMQGYAEEQEQLEDGDP
SLQGFLENIALATDADNENEDSNKVALMTVHLAKGLEFPVVFVAGLEENLFPSQMNLNTR
QELEEERRLFYVALTRAEQQAFLTYSVSRARWGKIIDAEPSRFLEEIDDKFLDWVNPAPI
STFNNSGLDESIFGGQPISHFERKRPKDFQKKKLNLSSKKDLKPLEKAKIQQGVSAHQEL
KVGQKVIHDRFGRGEVKALSGEPSNEKATILFETSGEKNLLLKFAKLRILN
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattatctagacgagttaaatgaagttcagaaattagcggtacaagccacccaa
ggccctgtgatggtgattgctggtgcgggctctgggaaaacacgtgttttgacttaccgc
atcgcacatcttataaataacggagttgatgcttttaatatcttggctcttacgtttacc
aataaggccgctcgcgaaatgaaagaaagaattgctaaagtagtaggcgagtctgaagct
aaaagcatctggatggggacttttcactcagtttttgctcgaattttgcgtgtcgaggcg
ccccgcttgggctacccttctaatttcacgatatatgatcagcaggatgcactttcggtg
atgcgaaaagtgattaaagatttacaactggacatcgatgtttataaacctaaaaccttg
ctgcatcgcatttctcagtttaaaaataatctaattaccgttagagcttattacaacaat
ccagagctgatggatgctgatgccgctgctctgaagcccaaaacgggagaagtttaccaa
gcttatgtggaacgttgtttcaaatctggtgctatggattttgatgacttattattgcgt
accaatgagattttgactcggtttccagaggttttggcaaaatatcaagagcgttttaaa
tacattcttgttgatgagtatcaagacacaaatcattcacagtatctgattgtgaaggct
ttagcttctcgctatgagaacatctgtgtcgtaggagatgatgcgcagagtatttatgca
tttcgtggggcaaatattcgaaatattttaaactttaaaaaagattataatgatgcacaa
tcttttgcgctggaacaaaactacaggtctacacaaaatatcgtcaacgctgccaataac
atcatcaaaaataaccgcgatcagctagaaaaaaatgtgtggacagccaatcaagaggga
aataaaattccagtttatcgtgcattgactgatgctgatgaggcgaggtacatcacttct
aaaatttttgaactgaaaatgaatgaaaattttcaagaagaagattttgctattttgtac
cgaaccaatgcacaatctcgagctctagaagaagcgctgaggaaaaaaaacattccgtac
cgaatttatggtggcatttcattctttcagcgaaaagaaattaaagatttggtttcctat
ttgcgcttattggtgaataaaaaagatgaagaagcgcttttgcgtatcatcaattaccct
aagcgtggtattggagactctacaatacaaaaattgctggtgtatgccgatgagcatcac
ttgagtttatttgaagtgatggaaaatctcaatcagcatggcccatatttaggtgtttca
tcaggagtcatcaaaaaacttcatgattttactaccatgattcaaagttttggtgtttta
ttgaagaacaataatatttatgatctaggtttgcagatagccaaacaaagtggtttgctc
aatacgctgagagaagacgaaacgcctgaaggaatcacccgaatggagaacttgcaggag
ttgctcaacagtatgcaaggctatgcagaagagcaagaacagctagaagacggcgaccct
agtttgcaaggtttcttagaaaatattgcgctagcgactgatgctgataacgagaatgaa
gacagcaacaaagtagctctgatgacggtgcatttagctaaaggcctagagtttcctgtg
gtttttgtagcaggtttggaggaaaatcttttcccttcacaaatgaatctcaatacacgc
caagagctggaagaagagcgacgcctgttttatgttgcgcttacccgtgctgagcagcaa
gctttcttgacttattcggtttctagagctcgctgggggaaaatcattgatgccgaacct
agccgatttctagaggaaatcgatgataaattccttgattgggtcaatcctgcacccatt
tctacttttaataatagtggtttagacgaatctatttttggaggtcaaccgatttctcat
tttgaacgaaaaagaccaaaagattttcagaaaaagaaactcaatctttcctcaaaaaaa
gatttaaagcctttagaaaaagccaaaattcagcaaggggtttctgctcaccaagagtta
aaagtcgggcaaaaagtgattcacgaccgatttggccgtggtgaagttaaagcacttagc
ggtgagcctagtaatgaaaaggctaccattttatttgaaacgagtggtgaaaaaaatctt
ttgctgaaattcgcaaaacttcgaattttaaattaa
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