Candidatus Ornithobacterium hominis: MSHRCOH1_08880
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Entry
MSHRCOH1_08880 CDS
T09176
Symbol
lptB
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K25152
gliding motility-associated transport system ATP-binding protein
Organism
ohm
Candidatus Ornithobacterium hominis
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ohm02000
]
MSHRCOH1_08880 (lptB)
Transporters [BR:
ohm02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Gliding motility-associated transporter
MSHRCOH1_08880 (lptB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_13
AAA_29
RsgA_GTPase
nSTAND1
AAA_30
AAA_23
Rad17
Mg_chelatase
AAA_27
AAA_22
HhH-GPD
MukB
Motif
Other DBs
NCBI-ProteinID:
CAI9430302
LinkDB
All DBs
Position
1:complement(1865466..1866164)
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AA seq
232 aa
AA seq
DB search
MQIEINQLSKFYGKQQALNNISFSFSENETLGLLGPNGAGKSTLMKILTGLQSPDEGGFK
VIRNGEAINFKAFKKIFGYLPENNPLYENMYVKEYLLFVANLRKLKPQKVDEVIERVGLT
LEKHKLIKSLSKGYRQRVGIAQAIIHEPELLILDEPTNGLDPNQIIEIRNVIKEIGRAKT
VIISTHLMQEVEALCSRVVLLKKGNLMADENIQNFKGQHSSLEEAFHQMTNL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattgaaatcaatcagttgagtaaattttacgggaaacagcaagcgttaaacaat
attagttttagtttttctgaaaatgaaacgctcggtttgctcggacctaatggtgctggg
aaatcaacgttgatgaagattcttactgggctgcagagccctgatgaagggggctttaag
gttataagaaatggtgaggctattaattttaaagcctttaaaaaaatttttggttattta
ccagagaataatccgttgtatgagaatatgtatgttaaagaatatctactattcgtagca
aatcttagaaaattaaaaccccaaaaagttgatgaagtcattgagcgagtcggtttaaca
ctcgagaagcataaattaattaaatccttatcaaaaggctatcggcagcgtgtaggcatt
gcgcaagcgataattcatgagccagaattgctcattttagatgaaccaactaatggtttg
gatccgaatcaaattattgaaatcagaaatgtaatcaaagaaattggtagggctaagacg
gtgataatttctacgcatctcatgcaagaggtcgaggctttgtgttcgcgagtggttttg
cttaaaaagggaaatttaatggcagacgagaatatccaaaattttaaagggcaacattca
agtctggaagaagcttttcatcaaatgacgaatttatga
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