Candidatus Ornithobacterium hominis: MSHRCOH1_09300
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Entry
MSHRCOH1_09300 CDS
T09176
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ohm
Candidatus Ornithobacterium hominis
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ohm03400
]
MSHRCOH1_09300
DNA repair and recombination proteins [BR:
ohm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSHRCOH1_09300
Archaeal homologous recombinant proteins
MSHRCOH1_09300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
UTP6_C
Motif
Other DBs
NCBI-ProteinID:
CAI9430385
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All DBs
Position
1:1959259..1960470
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AA seq
403 aa
AA seq
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MKIIHTADWHIGKRLHNFELDEDFQLFINWLTQIIQQEQVELILIAGDVFDFSNPSSHSR
QLFYNTMIRLQQLNCKIIITGGNHDSPAMLNAPREILNTINISVLGGMPNDEAEAILPIQ
NQQNKIELVVHAIPFLREVDLRKATDGISYEDRIKVMQNGIENIYKKSIDLGKRNYPHLP
HIAMGHLFTAGVSPSESEREIQIGNQAKFEAQRLGNGFDYIALGHIHKPQKVNAAVPAYY
SGSPLPLSFSERTDEKRILLLDTAKGFEPKSIPVPNFRKLIRLNGCLNEIQEKLKNLEVD
STLPSLLEVILEEKDYDTATEDTFLQIINTFKHPHAKIVKSRMIFENRVLGAHELFAQHE
HLNDLKPVEILDKMIASQKELKEEDKNHLRQVFHQLLEEIQSE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattattcatactgccgactggcatattggcaaacgtcttcacaattttgagctt
gatgaagactttcaacttttcattaactggctcactcaaataattcagcaagagcaagtt
gagcttattttaattgctggtgatgtttttgatttctctaatccttcttcacattcccgt
cagctgttttacaatacaatgattcgcttgcagcagttgaattgcaaaatcattatcaca
ggaggcaaccacgattctccagcaatgctcaacgccccgagagagattttaaatacaatc
aacatcagcgttttgggcggaatgcccaacgatgaagcggaggccattttacccattcag
aatcagcaaaataaaatagaactcgtggtgcatgcaattccctttctgcgtgaggttgat
ttgcgtaaagcaaccgatggcatttcctacgaagaccgaataaaagtgatgcaaaacggc
attgaaaatatctataaaaaaagcatcgatttaggaaaaagaaactatccgcatctccca
cacatcgccatggggcatctattcacggcaggcgtttcaccctcagagagtgaaagggaa
attcagattggcaatcaagctaaatttgaagcacaacgcctgggcaatggattcgattat
attgcattggggcacatccacaagccacagaaagtcaatgccgcagttcctgcttattat
tcaggttcgcctttaccgctttctttcagcgaacgaacagatgaaaaaagaattttattg
ctcgatacggctaaaggttttgagccaaaaagcatcccagttccaaacttcagaaaatta
ataaggctgaacggatgcttgaatgaaattcaggaaaaattaaaaaatcttgaagtagac
agtacattacccagcttgctagaagttattttagaagaaaaagattatgatactgcaaca
gaggacacatttttacaaattatcaatacctttaagcaccctcatgctaaaatcgtcaaa
agccgaatgatttttgagaatcgagttttgggagcacatgaattgttcgcccaacacgag
cacctcaatgatttaaaaccagtagaaattttagataaaatgatagcaagccaaaaagaa
ttaaaagaagaggataaaaatcatttgcgccaagtttttcatcaattattggaagaaatt
caaagcgaataa
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