Candidatus Ornithobacterium hominis: MSHRCOH1_09390
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Entry
MSHRCOH1_09390 CDS
T09176
Symbol
nikD
Name
(GenBank) nickel import ATP-binding protein NikD
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
ohm
Candidatus Ornithobacterium hominis
Pathway
ohm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSHRCOH1_09390 (nikD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ohm02000
]
MSHRCOH1_09390 (nikD)
Transporters [BR:
ohm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSHRCOH1_09390 (nikD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_22
oligo_HPY
AAA_21
AAA_29
nSTAND1
AAA_16
nSTAND3
AAA_23
Mg_chelatase
DEAD
RsgA_GTPase
IstB_IS21
AAA_33
SLFN-g3_helicase
DUF5906
TsaE
Motif
Other DBs
NCBI-ProteinID:
CAI9430403
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All DBs
Position
1:1977312..1978979
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AA seq
555 aa
AA seq
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MRKILEINQLFISFNGFQAVKHLTFDIHEKEILGIVGESGSGKSLTSLAIMGILPKSAKI
AGEILYCKEGEKVNLLQKKEANGKISMIFQEPMTSLNPSMKCGHQVAESLEVHAQLSKKE
RKLKVIALFEDVLLPHPERIYEAYPHQISGGQKQRVMIAMALASNPELLIADEPTTALDV
TVQKSILELLKHLRETKNLSIIFISHDLGVVSQLCDRVLVMYKGEKVEEGSVDKIFLSPE
KSYTKGLIACRPQLGANLHRLPTVSDFLKNPDFSPKEKNVSIEEEKIERIYNRAPLLEFN
HVEKFFYDSDWGSKNKFFKALENINFKLYKGESLGLVGESGSGKTTLSRALLMLQPPTHG
QIIYKGKDLTQLPSKELRKLRKEIQIIFQDPNSSLNPMQTIEEILTTPLKIHQISQNANE
RKEIATELLNKVNLPQSSLNKYPHEFSGGQRQRIGIARALAVQPELIVCDESVSALDVSV
QAQVLNLLNDLQDEFNLTYLFVSHDLSVVKHFCNRLLVLQKGRIVESGMAKSIYKNPKEK
YTKELINAIPVFQKS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagattttagaaattaatcaactctttatttcttttaacggatttcaagctgtt
aaacacttaacttttgatattcatgaaaaagaaattttaggcatcgttggtgaatctggc
tcaggaaaatcactgacttcattggctatcatgggaattctgccaaaatctgccaaaatt
gctggcgaaattctttactgtaaagagggagaaaaggtaaatcttttgcaaaaaaaagaa
gcaaatggcaaaatcagtatgatttttcaagagcctatgacttctctcaacccctcgatg
aaatgcggccaccaagtagcagaaagccttgaagtccatgctcaacttagcaaaaaagaa
agaaaattaaaagttattgctctttttgaagacgtcttgctcccccatccagaaagaatt
tatgaggcttatcctcatcaaatttctggtgggcagaaacagcgcgttatgattgcaatg
gctctagcttcaaatcctgagctactaattgccgatgaaccaacgacggcgctggatgtc
accgttcaaaaaagtattttggaactattaaagcatctaagagaaactaaaaatttaagt
attattttcatctcccatgacttaggtgtcgtttcacagctttgcgaccgcgtgctggta
atgtacaaaggtgagaaagtagaagaaggtagcgtggataaaatttttctaagccctgaa
aaaagttacaccaaaggcttaatcgcttgtagacctcagctgggagcaaacttgcatcgc
ttacccacggtttctgattttttaaaaaatcctgacttttctcctaaagaaaaaaacgtt
tctatagaagaagaaaagatagagcgtatttataatcgagctcctttactggaattcaat
catgttgaaaaatttttttatgactctgattggggttctaaaaataaattttttaaggct
ttagaaaatattaattttaaattatacaaaggagagtctctaggcttggtaggagagtct
gggagtgggaaaacgacattgagtcgtgctctgctcatgctacagccgcctacgcatggg
caaatcatttacaaaggaaaagatttgacgcaattgcccagcaaggaattgagaaagtta
agaaaagagattcaaattatttttcaagacccgaactctagcctaaaccctatgcagact
atagaagagattttaactacgccgttgaaaattcatcaaatttcacaaaatgcaaatgaa
cgaaaagaaatcgctactgaactgttgaataaagtgaatttacctcaaagttctctaaat
aaatacccgcatgaattctctggcgggcagagacaacgaatcgggattgcccgagctttg
gctgttcagccagaattaattgtgtgtgatgaaagtgtttctgccttagatgtttctgtg
caagctcaggttttaaatctacttaatgatttgcaagatgagtttaatttaacgtatctc
tttgtttctcatgatttatctgtggtgaaacatttctgtaatcggctactggtcttgcaa
aaagggcgaatagtagaaagtggaatggcaaaatctatttataaaaacccgaaagaaaaa
tatacaaaagaattaattaatgcaatacctgtttttcaaaaatcataa
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