Candidatus Ornithobacterium hominis: MSHRCOH1_09610
Help
Entry
MSHRCOH1_09610 CDS
T09176
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ohm
Candidatus Ornithobacterium hominis
Pathway
ohm03030
DNA replication
ohm03410
Base excision repair
ohm03420
Nucleotide excision repair
ohm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ohm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSHRCOH1_09610 (polA)
03410 Base excision repair
MSHRCOH1_09610 (polA)
03420 Nucleotide excision repair
MSHRCOH1_09610 (polA)
03440 Homologous recombination
MSHRCOH1_09610 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ohm03032
]
MSHRCOH1_09610 (polA)
03400 DNA repair and recombination proteins [BR:
ohm03400
]
MSHRCOH1_09610 (polA)
Enzymes [BR:
ohm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSHRCOH1_09610 (polA)
DNA replication proteins [BR:
ohm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MSHRCOH1_09610 (polA)
DNA repair and recombination proteins [BR:
ohm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MSHRCOH1_09610 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSHRCOH1_09610 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
Nairovirus_Gn
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
CAI9430446
LinkDB
All DBs
Position
1:complement(2030946..2033741)
Genome browser
AA seq
931 aa
AA seq
DB search
MLTPDKDKRLFLLDAYALIFRGYYAFIKNPIINSKGQDTSAIMGFMNSLLDLLRREKPTH
LAVVFDVGEIQTLRHDYFPEYKANRNETPEGICTAVPYIQEILNAMHIPVLFAAGYEADD
VIGTLSRKAEKQGYITYMMTPDKDYAQLVTDKVKMYKPASRGGGVEVWGIEEVKKKFGVD
RPEQVVDYLGMMGDSVDNIPGIPGVGAKTAQKFIKEYGSLEGLYENIAKLRGKLKQNVME
NRELAFLSKKLAKIITDAPVDFIEEKYTVDVPDFDKVKEIFAELEFRRLLENIYKTYDVE
DKTASESLHAQISIFDDEGEEAVKDKIFTDISTTKHHYQLVDSDLPIKLLIQNLEKQKQI
CVDCETTAIKALEAELVGIAFSYEGGKGYYVKFPEDFEQAKALAQKFKPILENPSILKIG
QNLKYDMKVLSQYGLQISAPIFDTMVAHYVINPDMRHNLDVLAETYLNYKTVKIEALIGK
KGKNQKSFKEVDLDTQTEYAVEDTDVTLQLKEIFSHKLNEVKKGEALLQEVEFPLVHVLA
GMEQEGISLDTNVLENLSQELETDLAKLEKQIFSDAGHEFNINSPKQLGEILFDELKVIK
NPKKTRTGQYSTSEDILLKIQDKHPMVEHVLIYRQLQKLKSTYVEALPKEINPKTGRVHT
VFAQTVAATGRLASNNPNLQNIPIRTERGQEVRKAFVAKDDEHLLLAADYSQIELRLIAG
LSGDEAMINSFLNHEDIHTATAAKIYSIPINEVTRTQRSNAKTVNFGIIYGVSAFGLSEQ
TKLSRAESKDMIDAYFESYPMLKKYMDEQVALARKQGFVETILGRRRYLREINSRNHVVR
SHAERNAVNAPIQGSAADIIKVAMVKLHKILNQEFKTKMLLQVHDELVFEVPKTELEAVQ
PIIKNTMENAVKFNVPLVVEAGVGENWFEAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgctgacacccgataaagataaaagactttttttgcttgatgcttatgccttgattttc
agaggatattatgcctttatcaaaaatccaataatcaactcaaaagggcaagacacatcg
gccatcatggggtttatgaactcgttgcttgatttgctcagacgagaaaagccaacacat
ttagccgtagtctttgatgtcggggaaattcaaactctgcggcacgactatttcccagaa
tataaagcgaaccgaaatgaaacgccagaaggaatctgtactgcggtgccttacattcaa
gagattttaaacgctatgcacattcctgtgctgtttgctgctggctatgaggctgatgat
gtgattggaacgctgagccggaaggctgaaaaacaaggctacataacttatatgatgacg
ccagataaggattacgctcagctggtgacagataaagtgaaaatgtataaacctgcctct
cggggcggtggcgttgaagtttgggggattgaagaggtgaagaaaaaatttggtgtagac
cgtcctgaacaagttgttgattacctaggaatgatgggcgatagcgtggataacatcccg
ggaattccaggcgtgggggcaaaaacagctcaaaaatttataaaagaatacggctctctc
gagggattgtatgagaatattgcgaagttgagaggaaagctgaaacaaaatgtaatggaa
aatagagaactggcttttctctcaaaaaaattagcaaaaattattacagatgctccagta
gactttatcgaagaaaaatatactgttgatgtacctgattttgataaggttaaagaaatt
tttgcagaactggaatttagacgattgctagaaaacatttacaaaacctatgatgtagaa
gacaaaacagcttcggaatctttgcatgcacaaatctcaatatttgatgatgagggggaa
gaagctgtgaaggataaaatttttacagatatttccacaaccaaacaccactatcagctg
gtagatagtgatttacctataaaattactgattcagaatttagagaagcaaaagcaaatc
tgtgtagattgtgagacgacagccatcaaggcattggaagcagaactagtgggcatcgca
ttttcttatgaaggcgggaaaggctattacgttaagttcccagaagattttgagcaagcg
aaagccttagctcagaaatttaaaccaattttagaaaatccttctattctgaaaatagga
caaaatttaaagtacgatatgaaagtgctgagccagtacgggcttcagatttcagcacca
atttttgatacgatggtagcgcattatgtgataaatcctgatatgcgacataacttggat
gttttggcagaaacttatttgaactacaaaacagtgaaaattgaggcactcatcgggaaa
aaggggaaaaaccaaaaaagctttaaagaagttgatttagatacccaaactgaatatgca
gtagaagacacggacgtgactctgcaactgaaagaaatatttagccacaagttaaatgaa
gtaaagaaaggagaagcattattgcaagaagtggaattccccttagtgcatgtcttagca
ggaatggaacaagaaggaatctcactggataccaatgtcttagagaatttaagccaagaa
ctagaaacagatttagccaagttagaaaagcaaatcttctcagacgctgggcatgaattt
aatatcaattcccccaagcaactgggagaaatcctcttcgatgagctgaaggtaattaaa
aatccgaagaaaacgcgcacagggcaatactcgacctcagaagatattttgcttaaaatt
caagacaaacacccgatggtggaacacgtcttaatttatcgtcaattacaaaagttaaaa
tcaacctacgtagaagctttgcccaaggaaatcaatcccaaaacgggtagagtacacacc
gtttttgcacagacggtagcagctactgggcgattggcatcaaataatcccaatttgcaa
aatatccccatccgtaccgagcgcgggcaagaagtaagaaaagcctttgtagcaaaagat
gatgagcatttgttgctagcagctgattattctcagatagagctccgcctgatcgctggt
ctgagcggcgatgaagcgatgataaattcttttctcaaccacgaagacattcatacagca
acagccgcaaaaatttatagtatcccaatcaatgaagttacccgcacgcaacggagtaat
gccaaaaccgtgaattttggcatcatttacggcgtttcggcgtttgggttaagtgagcaa
accaaactcagccgagccgagtctaaggatatgattgatgcttattttgaatcttacccg
atgctaaaaaagtatatggatgagcaagtagctttagcaagaaaacaaggttttgtagaa
accatattgggaagaagaagatatttgcgcgagatcaattcccgaaatcatgtggtaaga
agccacgcagaacgaaacgccgtaaacgccccaatacagggaagcgcagcagacatcatc
aaagttgcgatggtgaaattacacaagattttaaaccaagaatttaaaaccaaaatgctc
ttgcaggtacacgatgaattggtatttgaagtgccaaaaacagaattggaagccgtacaa
cccattataaagaatacgatggaaaatgctgtgaagtttaacgtaccgctagtcgtagaa
gcgggagttggtgaaaattggtttgaagcacattaa
DBGET
integrated database retrieval system
