Owenweeksia hongkongensis: Oweho_0175
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Entry
Oweho_0175 CDS
T01677
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
oho
Owenweeksia hongkongensis
Pathway
oho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Oweho_0175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oho03021
]
Oweho_0175
03019 Messenger RNA biogenesis [BR:
oho03019
]
Oweho_0175
Transcription machinery [BR:
oho03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Oweho_0175
Messenger RNA biogenesis [BR:
oho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Oweho_0175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
AAA_25
OB_RNB
AAA
Motif
Other DBs
NCBI-ProteinID:
AEV31197
UniProt:
G8R6Q4
LinkDB
All DBs
Position
complement(196151..197836)
Genome browser
AA seq
561 aa
AA seq
DB search
MYDINELKGKKLPELKEIAEALTVPKFKSLNKQDLVYRILDHQAVNPSLAKAPAAENTKP
ESKPKPAPKPQPEKKAEASNDKAPDTKPKSDAPQKPKRKPLPPRPESANKNNPLPDNKES
KDRPDRSEQNKGGQPRHDNRPKGDNNNPRQQRNDNRNDNRNDNRNQNKNDNRQSGNDHGN
NRNQRGREYEFDGIIVSEGVLEMMPDGYGFLRSSDYNYLNSPDDIYLSQSQVKLFGLKTG
DTVRGQIRPPKEGEKYFPLVKVEKINGREPDYVRDRVSFEHLTPLFPEEKFDLTSKGGTL
STRTIDLFSPIGKGQRGLIVAQPKTGKTTLLKEVANGIAANHPEAYMIILLIDERPEEVT
DMARSVNAEVVASTFDEPAERHVRVANIVLEKAKRMVECGHDVVILLDSITRLARAYNTV
SPASGKVLSGGVDANALHKPKRFFGAARKIENGGSLTILATALIDTGSKMDEVIFEEFKG
TGNMEMQLDRKIANRRIWPAIDLVSSGTRKEDLLLDKETLQRMWILRRHLSDMNAVEAME
FLHDRMSRTKDNTEFLISMNG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacatcaatgagttgaagggcaaaaagctacctgaattaaaggaaatcgctgag
gctcttaccgtaccaaaatttaaatcgctgaacaaacaagatcttgtttaccgcatttta
gatcaccaagctgtaaaccctagcctggcaaaagctcctgccgctgaaaatactaagcca
gaatctaagcccaagcctgctccaaaacctcaaccagagaaaaaagcagaagctagtaac
gataaggctccggatacgaagccaaaatctgatgcgcctcaaaagccaaaaagaaagccg
cttcctccacgccctgaaagtgcaaacaagaataatccacttcctgacaataaggaaagt
aaggatcgtccagaccgctcggagcaaaataaaggcggacaaccacgacacgacaatcgc
ccaaaaggtgataacaacaatccgcgtcagcaacgtaacgataacagaaatgacaatcgt
aacgacaaccgcaaccaaaataaaaacgacaatcgccaaagtggaaacgatcatggaaac
aatcgtaaccaaagaggccgtgaatatgaatttgatggcattatagtaagtgaaggtgtg
ctggaaatgatgcctgatggctatggtttccttcgttcttcagattataattacctgaat
tctccagatgatatttacctatcacaatctcaggtaaagttatttggactaaaaaccgga
gatactgtacgtggacaaattcgcccaccaaaagaaggtgaaaagtatttcccacttgta
aaagttgaaaaaattaatggccgtgagccagactatgtaagggatagagtttcgtttgaa
caccttacccctcttttccctgaagaaaaatttgaccttaccagtaaaggcggaacgctt
agcacacgtactatcgaccttttctcaccaataggtaaaggacaacgtggtcttattgta
gcgcaaccaaaaacgggtaaaaccactttgctaaaagaagttgccaatggcatcgctgcc
aaccaccctgaagcttacatgatcatcctcttgattgacgaacgcccggaagaggtgact
gatatggcacgtagcgtaaatgctgaagttgttgcttctacttttgatgagcctgctgag
cgccacgtgcgcgttgccaatattgtattggaaaaagcaaaacgcatggtagaatgtggc
catgatgtggttatccttttggatagtattacacgtcttgcccgtgcatacaacaccgtt
tccccagcttctggaaaagtactttctggtggtgtggatgctaatgccttacacaaacca
aaacgtttctttggtgctgcccgtaaaattgaaaatggtggttcattaacaattttggca
actgcacttatcgataccggttctaaaatggacgaagtaatctttgaagaatttaaagga
actggtaacatggagatgcaattggatagaaaaattgccaaccgcagaatctggccagca
attgaccttgtttcttccggtactcgtaaagaagaccttcttcttgacaaagaaaccctg
caacgcatgtggattcttagacgtcacctttctgatatgaacgctgtagaagccatggag
tttttacatgatagaatgagccgaaccaaggataataccgagttcctcatttccatgaat
ggttaa
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