Owenweeksia hongkongensis: Oweho_3085
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Entry
Oweho_3085 CDS
T01677
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
oho
Owenweeksia hongkongensis
Pathway
oho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Oweho_3085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oho03021
]
Oweho_3085
03400 DNA repair and recombination proteins [BR:
oho03400
]
Oweho_3085
Enzymes [BR:
oho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Oweho_3085
Transcription machinery [BR:
oho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Oweho_3085
DNA repair and recombination proteins [BR:
oho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Oweho_3085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
AEV34040
UniProt:
G8R2M8
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All DBs
Position
3454642..3455634
Genome browser
AA seq
330 aa
AA seq
DB search
MAILNFQKPDQVIMNHASETEGQFEFRPLEPGYGLTVGNALRRVLLSSLEGFAFISVKIE
GVEHEFSTIKGVVEDVTEIILNLKQVRFKRQIEDQEEEKINVSISGQDKLTAGDLGQFIS
GFQVLNSDLVICNMDPSVKLEMELVVEKGRGYVPAEENKKSNASIGTIFIDSIYTPIKNV
KYSIENYRVEQKTDYEKLIFEITTDGSVHPKKALTEAAKILIHHFMLVSDEKITLEDSKT
TETDNYDEEILHMRQLLKTKLVDMDLSVRALNCLKAAEVETLGDLVTFTKSDLMKFRNFG
KKSLTELDELVESKGLHFGMDIAKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaaacttccaaaagcctgatcaggttataatgaatcacgcttctgagact
gaaggtcagtttgagttcagacctttagaaccaggatacggattgaccgtaggtaatgct
cttcgcagagtattgctctcttcgcttgaaggttttgcttttatttcagtaaaaatagaa
ggtgttgagcatgagttttctactatcaaaggggtggtagaagatgtaactgaaatcatc
cttaacctgaagcaggttcgtttcaaaagacaaatcgaagatcaggaggaggaaaagatt
aacgttagcatctctggtcaagacaaattaactgctggtgatttgggacaatttatctca
ggattccaggtgttaaactctgacttggttatctgcaacatggatccttctgtaaagctg
gaaatggaacttgtcgtagaaaaaggtagaggatatgtaccagctgaagagaacaagaaa
agtaatgcctcaatcggtactatttttattgactctatctacactcctattaagaatgta
aagtatagcattgaaaactatcgtgtggagcaaaagactgactatgaaaagttgattttt
gaaattaccacagacggtagtgttcatcctaagaaagcccttactgaagctgctaagatt
ttgatccaccactttatgttggtgagtgacgaaaagatcactttagaggacagtaagact
accgaaactgataactatgatgaagaaattcttcacatgcgtcagttgcttaaaactaag
ctggtagatatggatctttcagtaagagcattaaactgcctaaaagctgccgaagtagag
actttgggagatttggtaacctttactaagagtgacttgatgaagtttagaaacttcggt
aaaaaatcacttactgaattggatgaattggtagaaagcaaaggtcttcacttcggtatg
gacatcgcaaagtataaattggataaggaataa
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