Owenweeksia hongkongensis: Oweho_3391
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Entry
Oweho_3391 CDS
T01677
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
oho
Owenweeksia hongkongensis
Pathway
oho03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Oweho_3391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oho03400
]
Oweho_3391
DNA repair and recombination proteins [BR:
oho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Oweho_3391
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Oweho_3391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
AAA_21
ATPase_2
AAA_33
AAA_22
AAA_14
AAA_25
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
AEV34341
UniProt:
G8R5M5
LinkDB
All DBs
Position
complement(3802810..3805665)
Genome browser
AA seq
951 aa
AA seq
DB search
MTQNHPVSEKDQIEVYGARVHNLKNIDVVIPRNELVVITGLSGSGKSSLAFDTIYAEGQR
RYIETFSAYARQFLGSLERPDVDKINGLSPVISIEQKTTSKNPRSTVGTVTEIYDFLRLL
YARGSVAYSYNTGEKMVSYTDDKIRELIIEQFAGKRINILAPLVRSRKGHYRELFDSILK
QGFVKARIDGEIVDVTKGMRLDRYKTHDIEVVVDRLKVENDSNDKRLRESITVAMQQGHG
IIMVVEHGQEKPRFFSRNLMCPSTGISYPEPEPNTFSFNSPKGACPKCNGLGEVSEIDMD
KVIPDPTKSIRKGGLTPLGDYKKTWIFNQLEIIGDKYGFDITTPIKDIPKKGMDVILHGS
DEAFEVENKNLGITRKYSINFEGIINFILNQNEEAKSKSIKRWAEGFMNKVPCDQCHGER
LKIESRHFKIGDKNISDLAGMSLGSLQNWLENIEPELSENQKQIATEILKELRTRVSFLL
NVGLNYLSLNRPAKSLSGGEAQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNHKLIESL
MELRDVGNSVIVVEHDRDMIEQADYILDIGPHAGRRGGNVVAAGTLQDILNSHSLTAQYM
NGEKEIAIPETRREGNGEFITLKGAKGNNLKNVSVKVPLGKLVVVTGVSGSGKSTLINET
LYPTLSAHFYNSVKKPLEHKSITGLDKIDKVIDIDQSPIGRTPRSNPATYTGVLSYIRDL
FANLPESKVRAYKPGRFSFNVKGGRCETCEGAGIRVIEMNFLPDVYVPCETCQGKRFNRE
TLEIRYKGKSIADVLDMSVNNAVEFFQSIPKIFNKVKTLRDVGLGYITLGQQSTTLSGGE
AQRVKLATELSKRDTGKTMYILDEPTTGLHFEDVRILMDVIDRLVNKGNSVVIIEHNMDV
IKLADHIIDVGPEGGEAGGNIVFEGTPEQILKSKNSYTGKFLKMEIDKVHS
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaaaccacccagtgagcgaaaaagaccaaattgaagtttacggagctcgcgtt
cacaatcttaaaaacattgatgttgttataccgcgcaacgagctagtggtaattacaggg
ttaagtggaagtggtaaatcatctcttgcctttgacaccatttatgccgaaggacagaga
aggtatattgaaactttttccgcctacgcacgtcaatttttgggaagcctggagcgtccc
gatgtggacaaaatcaatggcttgagcccagtgatttccattgagcaaaaaactaccagt
aaaaacccgcgctccactgtaggcactgttactgagatttatgatttcctccgtcttctt
tacgctcgtgggtcagtagcttatagctataatactggggagaaaatggtgagctatact
gatgacaaaatccgtgagcttatcattgagcaatttgctggtaaacggataaatatttta
gccccattagtacgttcccgtaaagggcactaccgtgagctatttgacagtattctaaaa
caaggttttgtaaaagcccgcattgatggtgaaatcgtggacgtaaccaagggcatgcgc
ttggatcgatacaaaacacacgacattgaagtagtggttgatcgattgaaggtagaaaat
gactcgaatgataagagacttcgcgagtcgataactgttgcaatgcagcaaggtcatgga
ataataatggtggtggagcatggacaagaaaagccacgcttttttagccgcaatctgatg
tgtccttctacgggtatttcttacccagagccagagcctaataccttttctttcaattct
ccaaaaggagcttgtccaaaatgcaatggcctaggggaagtgtcagaaattgacatggac
aaagttattccagacccaacaaaaagtattcggaaaggaggacttactccacttggcgat
tataaaaagacttggattttcaatcaattagaaattattggagataagtatggttttgac
atcacaactccaataaaggacattcccaaaaagggaatggatgttatactccatggatcg
gacgaagcttttgaagtagagaacaaaaatttgggtataacccgaaagtatagcatcaat
ttcgaagggattatcaactttattttaaatcaaaacgaagaggctaaaagcaaatccata
aaacgctgggctgaagggtttatgaataaagtgccatgtgaccaatgtcatggtgaacga
cttaaaattgaatcccgacattttaaaattggagacaaaaacatctctgatttagcgggt
atgagcttaggctccctacaaaattggcttgaaaacattgagcctgagcttagtgaaaat
caaaagcaaattgctaccgaaattttaaaggaactaagaaccagggtttcgtttctgctt
aatgttggattaaattatttgagcttaaatcgtccagcaaaatccctttctggtggtgaa
gctcaacgtataagactggctactcaaataggctcacagcttgtaaatgtgctttatatt
cttgatgaacccagtattggccttcatcaaagagacaatcacaagttgattgaatcctta
atggaacttcgtgatgtaggaaactctgtaattgtggtggagcatgaccgagacatgata
gagcaagccgactacatattggatattggcccacatgccggccgcagaggtggaaatgta
gtagctgcaggcacgcttcaagatattctgaacagccatagtcttacggctcaatatatg
aacggagaaaaagaaatcgccatccctgaaacccgaagagaaggaaatggtgaattcatt
actcttaaaggagccaaaggaaataacttaaaaaatgtttctgttaaggtgccattagga
aagcttgtggtggtgactggtgtatctggtagcgggaaatcaacactgatcaatgaaacc
ctttaccctaccttaagtgcgcacttttataattctgtaaaaaagccgcttgaacataaa
agcataaccggtcttgataaaattgataaggtaatagacattgatcagtcgccaattggt
agaactcccagatcaaatccagcaacctatacaggtgtactttcttatatccgggatttg
tttgccaatttacctgagtcaaaggttcgcgcttacaaaccaggccgattcagctttaat
gtaaaaggaggtcgctgtgaaacttgtgaaggtgctggaatcagagtaatcgaaatgaac
tttcttccagatgtatatgtaccttgtgaaacctgtcaagggaaacgattcaatagagaa
acattagagattcgttacaagggtaaatctattgcagatgtccttgatatgagtgtcaat
aatgccgtagaattctttcaaagcatccccaagatttttaacaaagtgaaaactttgcga
gatgtaggacttggttacatcactttgggacaacaatccacaacgctttctggaggtgaa
gctcagcgcgtaaaactggccactgaactcagtaagcgcgatactggaaagacaatgtat
atccttgatgaacctactacagggttgcactttgaagacgttcgtatactcatggatgta
atcgataggttagttaataaagggaactcggtagtgattattgagcataatatggatgta
atcaaattagctgaccatattattgatgtgggccctgaaggtggtgaagctggaggaaat
atcgtatttgaaggtacacctgagcaaattttgaaaagtaaaaacagttatactggaaaa
ttcctaaaaatggaaattgataaagttcactcgtaa
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