Oceanobacillus iheyensis: OB0007
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Entry
OB0007 CDS
T00093
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
oih
Oceanobacillus iheyensis
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oih03032
]
OB0007 (gyrA)
03400 DNA repair and recombination proteins [BR:
oih03400
]
OB0007 (gyrA)
Enzymes [BR:
oih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OB0007 (gyrA)
DNA replication proteins [BR:
oih03032
]
Prokaryotic type
DNA Topoisomerases
OB0007 (gyrA)
DNA repair and recombination proteins [BR:
oih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OB0007 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
NTase_sub_bind
PHP
Motif
Other DBs
NCBI-ProteinID:
BAC11963
JAMSTEC:
OB0007
UniProt:
Q8EU82
LinkDB
All DBs
Position
7123..9636
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AA seq
837 aa
AA seq
DB search
MADINRPRVSEINISNEMRTSFLDYAMSVIVARALPDVRDGMKPVHRRILYAMNDLGMHS
DKAYKKSARIVGEVIGKYHPHGDSAVYETMVRMAQTFSYRYMLVDGHGNFGSVDGDSAAA
MRYTEARMSKISMELLRDINKDTIDYQDNYDGTEREPVVFPARFPNLLVNGTSGIAVGMA
TNIPPHHLGETIDAVLAISQNPDITIDEIMENHLPGPDFPTAGQILGRSGIRKAYETGKG
SITIRAKLNIEQGKNDKETIIVTELPYQVNKAKLIEKIAELVRDKKVEGITDLRDESDRN
GMRIVIELRRDANANVVLNNLYKHTSLQTTFGINMLALVDGQPRVLNIKQCLSYYLEHQK
VIIKRRTQFELNKAEARAHILEGLRIALDHLDEVIELIRSSKTADIAREGLMERFKLSEK
QAQAILDMRLQRLTGLEREKIEDEYKELQALIEELKAILADEEKVLEIIREELTEIKEKY
KEDRRTEIVAGGAGFFEDEDLIPEENIVITLTHQGYIKRLPASTYRTQKRGGRGIQGMGT
NEDDFVEHLVSTSTHDTILFFTNKGKVYKAKGYEIPEFSRTAKGIPIINLLQVEKGEWVN
AVISVNQFDEEAYLFFTTKHGIAKRTSLEKFRNIRKGGLIAVGLREEDELISVRLTDGQK
EMMIATKNGYLIRFEETQIRSMGRTAAGVKGISLRGDDVVVSMEIIEPGSKILHVTNKGF
GKQTDESEYRRINRGGKGVFTCKLDEKTGNVVAVKAVNGDEDLMLITIAGVLIRIQVQDI
SQTGRNTKGVHLIRLQDGEEVATVTRIEKDDEEDVEDIEVVEGETTDPSTETNEDKE
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcagatataaatcgtccgagagtatcggaaattaatattagtaatgagatgcgtacg
tcattcctcgattatgcgatgagtgtaattgtagctcgtgcattaccagatgtgcgtgac
ggaatgaaaccagttcatcgtcgtattctatatgcgatgaacgacttaggtatgcattca
gataaagcatataagaagtcagctcgtattgttggtgaagttattggtaaatatcaccca
catggtgattccgcagtatacgaaacgatggtacgtatggcgcaaacttttagctatcga
tatatgttagtcgatggacacggaaacttcggatccgtagatggtgactcagcagcagct
atgcgttatacagaagctagaatgtccaaaatttccatggaattactccgtgatattaat
aaagacacgatcgattatcaagataactatgacggtacagaaagagagcctgttgtattt
ccagcacgttttccaaatttacttgtaaatggtacatctgggattgcagttggtatggcg
acgaatatcccccctcatcatttaggggagacgattgatgctgtactggctattagtcaa
aatcctgacattacgatagacgaaataatggaaaatcatcttccaggtcctgattttcca
actgctggtcaaatattaggccggagcggtattcgaaaagcatatgagactggtaaagga
tctattaccattcgtgcgaagttaaatatcgaacaaggtaaaaatgataaagaaacaatt
attgtcacagaattaccttatcaagttaacaaagcaaaactgattgaaaaaattgcagaa
ttagttcgtgataagaaagtagaaggtatcactgatcttcgcgatgaatctgaccgtaat
ggaatgcgaattgtaattgaattacgacgtgatgcaaatgcgaatgttgtacttaataat
ttatataagcatacgtccctacaaactacatttggcatcaatatgctggcacttgtagat
gggcaaccaagagtacttaatataaagcaatgtcttagctactacttagagcatcaaaaa
gtcatcataaaacgtcgtacgcaatttgaattaaataaggcagaggcacgtgcacatatt
ttagagggtctacgtatagcactggatcacttggatgaggtaattgagttaatccgtagt
tctaaaacagctgatattgctcgcgaaggtttaatggaacgatttaaattaagtgagaaa
caagcacaagctatcttggatatgcgtcttcaacgtttaacgggattagagcgagagaaa
attgaagatgaatataaagagctgcaggctttgattgaagaattaaaagcaattttagcg
gatgaagaaaaagtattagagattatccgtgaagaattaacggagattaaagaaaagtat
aaagaagatcgaagaacagaaatcgtagcaggtggcgcaggattctttgaagatgaagat
cttatcccagaagaaaatatcgtcataacgttaactcatcaaggttatatcaaacgatta
cctgcatctacgtaccgcacacaaaaacgtgggggacgtggaatacaaggtatgggtact
aacgaggatgattttgtagaacatttagtatctacatctacacatgatacgatcctcttc
tttaccaacaaagggaaggtttataaggcgaaagggtatgaaattccggagttcagccga
actgcgaaaggcataccaattattaatcttcttcaagtggaaaaaggggaatgggtgaat
gctgttatatccgttaatcaatttgatgaagaagcgtacctattctttacgaccaaacac
ggaattgcaaaacgtacatctcttgagaaattccgtaatatccgtaaaggtggattaatt
gcagtcggccttcgagaagaagatgaattaatatccgttcgtctgacagatggacaaaaa
gaaatgatgatagcaacgaagaacggttatctcattcgttttgaagaaacacagattcgt
tcgatgggacgaacggctgcaggtgttaaagggatttctttacgaggcgatgatgtcgtc
gtttccatggaaattattgaaccaggatctaaaattcttcacgttaccaacaaaggattc
ggtaaacaaaccgatgaatcagaataccgtcgtattaatcgtggtggtaaaggggtattt
acttgtaaactcgatgaaaagacgggaaatgttgttgcagttaaggcagtaaatggtgac
gaagacttaatgttaattaccattgccggtgtattaatccgaatacaagtgcaggacata
tcacaaacaggtagaaatacaaaaggggttcacttaattcgattgcaggatggtgaagaa
gtagctacagttactcgtatcgaaaaagatgatgaagaagatgtcgaggatattgaagta
gtagaaggagaaacaacggatccatcaacagagacaaacgaagataaggaataa
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