Oceanobacillus iheyensis: OB0094
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Entry
OB0094 CDS
T00093
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
oih
Oceanobacillus iheyensis
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oih03400
]
OB0094
DNA repair and recombination proteins [BR:
oih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OB0094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
AAA
nSTAND_NTPase5
NTPase_1
Rad51
AAA_16
nSTAND3
DUF7125
AAA_14
AAA_5
ATPase_2
SLFN-g3_helicase
NACHT
ABC_tran
KTI12
AAA_24
DAP3
NPHP3_N
Glyco_transf_N
TK
GvpD_P-loop
Elong_Iki1
ATP-synt_ab
AAA_30
KdpD
RsgA_GTPase
MCM
ArsA_ATPase
HypA
TIP49
Isochorismatase
AAA_31
DZR
DUF8455
Motif
Other DBs
NCBI-ProteinID:
BAC12050
JAMSTEC:
OB0094
UniProt:
Q8EU04
LinkDB
All DBs
Position
114315..115688
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AA seq
457 aa
AA seq
DB search
MAKRKTKFVCQECGYESAKWMGKCPACHQWNTMVEEIDPASVKGRTGYATSTTSAGKPEK
ITAIESKKEPRITTKMREFNRVLGGGIVLGSLVLIGGDPGIGKSTLLLQISAQLAEKDMS
VLYVSGEESTRQTKLRADRLDITTDQLYVLSETNLYDISKQVEEVKPSFVVIDSIQTIFK
EEVTSAPGSVSQVRECTMELMKIAKSNGIPIFIVGHVTKEGSIAGPRLLEHMVDAVLYFE
GERHHTYRILRGVKNRFGSTHEMGIFEMKEEGLREVMNPSEIFLEERSEGAAGSTVVASM
EGTRTVLVEIQALISPTSFGNPRRTATGIDHNRVPLLMAVLEKRVGLMLQNQDAYIKVAG
GVKLDEPAIDLALAVSIASSFRDQPTNPNDIFVGEVGLTGEIRRVSRIEQRVQEAAKLGF
KRVICPKNNLDGWNYPSGIEVIGVSSVQEALDIGLRH
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaagaaaaacaaaatttgtatgtcaggaatgtgggtatgaatcagctaaatgg
atggggaaatgtccggcttgtcatcaatggaataccatggtggaggaaatagatccagcc
tcagtaaaaggtcggacaggctatgctactagtacgacatctgcaggtaagcctgaaaaa
atcacagccattgaatccaaaaaagaacctagaatcactacaaaaatgagagagttcaac
agagttctgggaggcggcattgtactaggctcactggttttaattggaggagatccgggt
attggtaaatcgacacttttactccaaatatccgctcagttagcagaaaaagatatgtca
gtactttatgtttctggagaggaatctactcgccaaacaaaattacgagcagatcgactc
gatattacaacagatcagttatatgttttatcagaaacaaatttatatgatattagtaaa
caggtggaagaagtaaaaccttcctttgtggttatcgattcgatacaaaccatatttaaa
gaagaggtaacgagcgctccaggaagtgtttctcaagtacgtgaatgtacaatggagctt
atgaaaatagcaaaatcaaatgggatacctatttttattgttggacatgtaacgaaagaa
ggttccatagctggtcctcggttattagagcatatggtagatgctgttctgtattttgaa
ggcgagcgacatcacacatatcgtatattacgaggagtaaagaaccgttttggtagtacg
catgaaatgggaatatttgagatgaaagaagaaggattacgagaagttatgaatccgtct
gagatattcctagaagagcggtcagaaggggcagcaggatcaacagttgtggcatcgatg
gaaggaacaagaacggtattggtagaaatacaagcattaatttctcctactagtttcgga
aatccacgtcgtaccgcaacaggtatagaccacaatcgtgtaccactattaatggctgtt
ttagaaaagcgtgtgggcttgatgcttcaaaatcaagacgcatatataaaagttgctggc
ggggtaaagttagatgagccagctattgaccttgcattagctgtaagtatcgcatctagc
tttcgagatcaaccaacaaatccgaatgatatttttgtaggtgaagttggtttaactggt
gaaattagaagggtttctcgaattgaacagcgtgtacaagaagctgcaaaattagggttt
aaacgcgtaatatgtccaaagaacaatttggatggctggaattatcctagtggaattgaa
gtcatcggtgtatcaagtgtacaagaggctttagatattggattacgtcattaa
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