Oceanobacillus iheyensis: OB0145
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Entry
OB0145 CDS
T00093
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
oih
Oceanobacillus iheyensis
Pathway
oih03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OB0145 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oih03021
]
OB0145 (rpoA)
03400 DNA repair and recombination proteins [BR:
oih03400
]
OB0145 (rpoA)
Enzymes [BR:
oih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OB0145 (rpoA)
Transcription machinery [BR:
oih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OB0145 (rpoA)
DNA repair and recombination proteins [BR:
oih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OB0145 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
DUF961
HTH_11
SAM_EPH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BAC12101
JAMSTEC:
OB0145
UniProt:
Q8ETV9
LinkDB
All DBs
Position
154474..155418
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISENATFGKFVVEPLERGYGATLGNSLRRILLSSLPGAAVTTVQIDG
ALHEFSTVDGVVEDVTTIILNLKKLALKIYSEEPKTLEIDVQGEGAVTAADLTYDSDVEV
MNPDLHIATLNSKGNLHMKLIAERGRGYRPAEENKNDDQPIGVIPIDSIFTPVSRVTYQV
ENTRVGQVANYDKLTMDVSTDGSIRPEEAVSLGAKIITEHLNIFVGLTDEAQNAEIMVEK
EEDQKEKVMEMTIEELDLSVRSYNCLKRAGINTVQELANKSEEDMMKVRNLGRKSLEEVK
VKLEDLGLGLRDDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatcgaaaagccaaagattgaaacggttgaaattagcgagaatgctacattt
ggaaaattcgtggttgaaccgcttgaacgtggatatggtgccacacttggaaactccttg
cgtcgtatcttattatcctcactgccaggtgctgctgtaaccacagtacaaattgatgga
gctttacatgagttttcaacagttgatggtgttgtagaagatgttacaactattatcctc
aaccttaagaaactagctcttaaaatttattctgaagaaccaaaaacattagaaattgat
gttcaaggtgaaggtgctgtaactgctgcagatttaacgtatgacagtgatgtggaagta
atgaacccggatttgcatattgcaacgcttaatagcaaaggcaatcttcatatgaagcta
attgcagagcgaggccgtggttatcgtccagcagaagagaataaaaatgatgatcaacca
atcggtgtcattccgatcgactccatcttcacacctgtttcgcgcgtgacttatcaagtg
gaaaacactcgtgtaggtcaagtggcaaactatgataaattaacaatggatgtatctacg
gatggaagcattcgtcctgaagaagcagtttctttaggtgctaaaatcatcacagaacat
cttaatatttttgtaggtttaacagatgaagcacaaaatgccgaaatcatggtggaaaaa
gaagaggatcaaaaagagaaggttatggaaatgaccatcgaagaacttgatctatctgtt
agatcttacaactgcttgaaacgtgctggaattaacacggttcaagagcttgcgaataaa
tcagaagaagatatgatgaaagttcgtaatttaggacgtaaatctttagaagaagtaaaa
gtaaaattagaagacctaggattaggtctacgagatgatgactga
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