Oceanobacillus iheyensis: OB0239
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Entry
OB0239 CDS
T00093
Name
(GenBank) DNA mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
oih
Oceanobacillus iheyensis
Pathway
oih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OB0239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oih03400
]
OB0239
DNA repair and recombination proteins [BR:
oih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
OB0239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_21
Motif
Other DBs
NCBI-ProteinID:
BAC12195
JAMSTEC:
OB0239
UniProt:
Q8ETM1
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Position
268552..270456
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AA seq
634 aa
AA seq
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MNNATFDKLQYNELKQIINSYCVSGLGKQLLDKLEPSSNINVVKNRLNETTEARKIIDAK
GHIPFLGVSNIDSIIQNIEKDIILDPSDLISVSDFLRGCRKIKSFMMEKEFFAPVLASYA
NSMTEFQHVEEEIDFSIKGNSVNSAASRELKRIRNKIDIAEERIKDRLNKFLNNDTNKKY
IQEAFISKKDDRYTIPIKASYKNQVSGTIIDVSSKGSTVFMEPSTVTKLGGELASLRAEE
AIEEYQVLATLSGMILENIYEIKINMELISQYDMVFAKAKFSKEIDGSEPKLNDYGYIKL
VDCKHPLLVGEAVPLNFEIGQDYRSLIITGPNAGGKTIVLKTIGLLTLATMSGFHIAASK
ETEIAVFENIYADIGDNQSIENALSTFSSHMKNLSEIMRLSNNNTLLLFDEIGSGTEPNE
GSALAISILEEFYHMGCITVATTHYGEIKRFSEIHDDFMNAAMRFDNDTLEPLYQLVIGK
SGESNALWISRKMNVPENILQRASQYMQNKGYQLERVNENKIRKPKIKKEKSVQYKYEYS
KGDRVKLLEHDDIGIVYKEMDSSYNVVVYYKGEFIDVHVKRISLDISAKELYPAGYDLET
LFVDHKTKKMEHDLERGSKKALRKVEKEIRKNRE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgcaactttcgataagttacaatacaatgaattaaaacaaataattaattct
tactgtgttagtggattaggtaaacaattgctagataaattagaaccaagttcaaatata
aacgtagttaagaatcgtttgaatgaaacaacagaagcgcgaaaaatcatagatgctaag
gggcatatcccatttttaggagtatctaacattgatagcatcattcaaaatattgaaaag
gatataattcttgatccgagtgatctgataagtgtgtcagactttttaagaggttgtaga
aaaattaaatcgtttatgatggaaaaagaattttttgctccagtactagcatcttatgct
aattcaatgactgaatttcagcatgtcgaggaagaaattgatttctcgatcaaaggcaat
agtgttaactcagctgcaagtagagaattaaagagaattcgaaacaaaattgatatagca
gaagaaagaataaaagatcgcttaaataaatttttaaataatgatacgaacaagaagtat
attcaagaggcctttattagtaaaaaagatgatcgttatacgattcctattaaggcttct
tataaaaatcaagtttcaggtaccatcattgatgtatcatctaaaggttccactgtgttt
atggagccaagtacagttaccaagttaggtggggaacttgcgagtttaagagctgaagag
gcaatagaagaatatcaagtacttgctactttatctgggatgattttagagaatatttat
gaaatcaagattaacatggagcttataagtcaatatgatatggtctttgcaaaagccaag
ttcagtaaggagattgatggttcagagcctaaattaaacgattatggttatataaaattg
gtggattgcaagcatccgctcttagtaggagaagctgtaccacttaattttgaaattggc
caagattatcgtagcctaattatcacgggacctaatgctggcggtaagacgattgtatta
aaaacaattggattactgactttagcaaccatgtcaggtttccatattgctgcaagtaag
gaaacggaaatagccgtatttgaaaacatctatgcagatattggggacaatcaaagtata
gaaaatgcgctaagtacattttcatctcatatgaaaaacctctcagagataatgcggtta
tcaaataataacacccttttactattcgatgaaatcggcagtgggacagaaccgaatgaa
gggtctgcacttgcaatatcaattctagaagaattttatcacatgggatgcattactgta
gcaacaactcattatggtgaaattaagcggttctcagaaatacacgatgactttatgaac
gcagcaatgcgatttgataatgatacattggagcctttgtatcaactagtaataggaaaa
tcaggagaaagtaatgcactttggatttctagaaaaatgaatgttccagagaatatttta
caaagagcgagtcagtatatgcagaacaaaggatatcaattagagcgtgtcaatgaaaat
aaaatacggaaacctaaaatcaaaaaagagaaaagtgttcagtataagtatgaatatagt
aaaggtgaccgtgtgaagttattagaacatgatgatattgggattgtatataaagagatg
gatagttcctataatgttgttgtgtattataaaggagaatttattgacgtacatgtgaag
cgaatttctttagatatctcggcaaaggaattatatccagcaggctatgatttagagaca
ttgtttgttgatcataaaacaaagaaaatggaacatgatttggaacgaggttcaaaaaaa
gcacttcgaaaagtagaaaaagaaattagaaagaatagagaatga
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