Oceanobacillus iheyensis: OB1182
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Entry
OB1182 CDS
T00093
Symbol
addA
Name
(GenBank) ATP-dependent deoxyribonuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
oih
Oceanobacillus iheyensis
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oih03400
]
OB1182 (addA)
Enzymes [BR:
oih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OB1182 (addA)
DNA repair and recombination proteins [BR:
oih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
OB1182 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
DEAD
AAA_12
ResIII
AAA_30
AAA_16
DUF5633
Motif
Other DBs
NCBI-ProteinID:
BAC13138
JAMSTEC:
OB1182
UniProt:
Q8ERW5
LinkDB
All DBs
Position
1233902..1237633
Genome browser
AA seq
1243 aa
AA seq
DB search
MVNWTKEQEEAIYTSGSDILVAAAAGSGKTAVLVERIIQKLLAEHNPTNIDALLVVTFTN
AAAQEMRNRVGAALEQALAANPSSIHLKKQLSLLQRASISTLHSFCLDIVKKNAYILDID
PSFRIADDMEMDLLKQEVLDDLLEEWYGDSNPNQDSFFEVVNRFTSDRSDAEMEELIRSL
HTFAMQSPWPNQWLDKLVQTYNIPEEWTEEELPWMNVLRDEVSRQLDAVSQEIDIAYSIT
QEADGPYHYAKTIEEEKAIIQEALKNMESWKYLQQSMLQVKFGKLSGKKVDCDEEKKTKV
KKLRDSYKKRFQKMQEVWFARNLDAHVYDMRVLAPVIKHLVELVKQFQDSFAKVKKEKAV
VDFSDLEHYCLQILIDESSTEEEVIPSTVAMQLQRQFTEVLVDEYQDTNMVQETILQLIS
DRQGSGNMFMVGDVKQSIYRFRHAEPSLFIDKYKRFSNSDDPSIRIDLARNFRSRENVLL
GANYIFRQLFDEDLGEISYDDAAELIYGNKMYDDHPLEAKPELLLIDNNSEDVEQSDNEE
TVEDLEKAQIEARAYAKQIKNWIGTPEDEIPMQVVDKATGKQRDLQYKDIVILMRSMTWA
STIADELQQQGIPTYADLSTGYFEAIEIKVMLSFLKVIDNPRQDIPLASILRSPIIGLEE
DQLASIRLADRKASFYEAVQRYLQNEQDNSDTVKSLIRFMEMLNDFRQSARQGSLSELIW
DIYRETGYYDFVGAIPGGKQRQANLRALYDRARGYESTSFRGLYRFLRFIERMEERGKDL
GAARALSEQEDVVRIMTIHKSKGLEFPIVILGGMNKEFNQRDLSEKYLLHKDLGFASKYI
DPVKRIQYPTLYYHAVRQAKFRDMLSEEIRVLYVALTRAKEKLLMVGTVPSIEKKLEKWQ
RIVDHPSWVLPAYFRMESKTYLDWVGPALLRHVGSEKIRTENIGNQVLESINQDPSDWQI
TMNHALDYMDMKDSSMDNDDNLKEKVFNWESVETEQEGLKNDVDARLSYEYAYKQATVFR
AKQSVTELKRQQEVKDDYSDQQILPPSHGPIGKRPNFLQKKLKLSPAEKGTALHTVMQHL
PMTHVLSEPEIEENIEKMVLEEKLTRMEADSINIRAVERFFHTEIASKIISGNDMHREVP
FSIMLPASEVYANWKDQSNEKVLIQGVIDCLLQADTGWIILDYKTDFIEDNPTSQKEQEL
IHRYQTQMTLYRRAIEQIWKQPVEQTYLYFFSQQLLIEVPYRD
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggttaattggaccaaggaacaagaagaggcaatatatacaagtggttcggatatatta
gttgctgctgcagctggatctggtaagacagctgtattggtagaacgaattattcaaaaa
ttgttggcagagcataatcctacaaacattgatgcattattagtagtgacatttaccaac
gctgcagctcaagaaatgagaaaccgagttggagcggctctagaacaagctttggccgca
aaccctagctctattcatttgaaaaaacagttgtctttactacaacgagcatctatttcg
acgctacattctttttgtctggacattgtaaagaagaatgcatatattcttgatattgac
ccttcgttcaggattgcggatgatatggaaatggatttactgaagcaagaagtgcttgat
gatttattagaagaatggtatggagattctaatccaaatcaagacagtttttttgaggtt
gttaatcgatttacaagtgatcgttcggatgcagagatggaagaattaattcgaagtttg
catacatttgcaatgcaaagtccatggccaaaccaatggctagataagctggtgcaaacg
tataatataccagaagaatggacggaagaagaattaccttggatgaatgtattaagagat
gaagtgtcacgacaattggatgcggttagtcaagaaatagatatcgcttattccataaca
caagaagctgatggaccttatcattatgcaaaaacaatcgaagaggaaaaggctatcatc
caagaagcactgaaaaatatggaatcatggaagtatcttcaacagtctatgttacaagtg
aagttcggtaaactatctggtaaaaaagtagactgtgatgaagagaaaaaaacgaaggtg
aaaaagttacgtgatagttataagaagcgatttcaaaaaatgcaagaagtatggtttgct
agaaatttagatgcacatgtatatgatatgagagtgctcgcaccggtgattaaacatctt
gttgaattagtaaaacaatttcaggattcctttgcaaaagtgaagaaagaaaaagctgta
gttgatttttcagatttagaacattattgcttacaaattttaatcgatgaatcatcaact
gaggaagaagtgatcccttcaacggttgcgatgcagttacagaggcaatttacagaagtg
ctcgttgatgaataccaagatacaaatatggtacaggaaaccattttacaattaattagt
gatcgtcaaggaagcggaaatatgttcatggttggtgatgtgaaacaaagtatttatcgt
ttccgtcatgctgaaccatcattatttatagataagtacaaacgtttttctaattcggac
gacccatcgattcgaatagatttagcgagaaattttcgaagcagagaaaatgtcctgtta
ggtgcgaattatatctttcgtcaattatttgatgaagatcttggggaaattagctatgat
gatgcagccgaacttatatacggaaataagatgtatgacgaccatccactagaagcaaag
cctgaattactattaattgataacaatagtgaagacgttgaacaatccgacaatgaagag
acagtggaagatttagaaaaagctcagattgaagcccgagcctatgcgaaacaaattaaa
aattggataggtacaccagaagatgaaattccaatgcaagtagtcgacaaagcaacaggt
aaacaaagggatttacaatataaggatatcgttattttaatgcgatcgatgacatgggca
tcaacaattgctgatgagctacaacagcaaggtataccaacgtatgcagatttgtctacg
ggttactttgaagcaatagaaattaaagtgatgttaagctttttaaaagtcatcgataac
cctagacaagatattccattagcttccatacttcgttcaccaattatcgggctagaagaa
gatcagcttgcttccattcgattagctgatcgaaaagctagtttttatgaagctgttcag
cgctatttacaaaatgagcaagataatagtgacactgtaaagtcgttaatacgctttatg
gagatgttaaatgattttcgtcagtctgctcgacagggttctttatcagaactgatttgg
gatatttaccgggagaccggttattatgatttcgttggtgccataccaggtggaaaacaa
cgccaagccaacttgcgagctttatatgaccgagctcgagggtatgaatcaacttctttc
cgcggtttatatcgttttttacgatttatcgaacgaatggaagaaagagggaaggactta
ggagctgctcgtgccttaagtgagcaggaagatgttgttcggattatgaccattcataag
agtaaaggattggaatttcctatcgtgattctaggaggaatgaataaagaatttaatcaa
cgggatttatcagagaaatatcttcttcataaagacttaggatttgccagtaaatacatt
gatcctgttaaacgaattcaatatcctactctttactatcatgctgtaagacaagctaaa
tttcgggatatgttatccgaagaaatacgtgtgttatacgttgcgttaacacgcgcaaaa
gaaaaactattaatggtagggacggttccttctatagagaaaaaacttgaaaaatggcaa
cgtattgttgatcatccaagttgggtgttaccagcatattttcgtatggaatcgaaaacg
tatcttgactgggtagggcctgcgttattgaggcatgttggatcagaaaaaatcaggact
gaaaatataggaaatcaagtcttggaatccattaatcaggatccatcagattggcaaatt
acaatgaatcatgctttagattatatggacatgaaagactcttctatggataacgatgac
aatttgaaagaaaaagtatttaattgggaaagcgtagaaaccgaacaagaaggtttaaag
aacgatgtagacgcgcgattgtcatatgaatatgcttataaacaagcaacagtatttcgt
gcgaaacaatcagtgacggaattaaaaaggcaacaagaggtaaaggatgactatagtgac
caacaaatcttgccgccatcacatggtccaatcgggaagagacctaatttcttacagaag
aaactgaaactatctccagctgaaaaaggtacagcattgcacacagttatgcaacattta
ccgatgacacatgtattgtcagaaccagagatcgaagaaaatatagagaaaatggtgctc
gaagaaaagctaacacgaatggaagcagatagtattaatattcgagcagtcgagcggttc
tttcacacggagattgcgtcaaaaattatcagtggaaatgatatgcatcgggaagtccca
tttagtatcatgcttccggcaagtgaagtctatgccaactggaaagatcaatcgaatgaa
aaagtacttatacagggagtaatcgattgtttacttcaggcggatacaggctggattatt
ttagactataaaacagactttattgaagacaaccctacttctcaaaaagaacaggaatta
atacatcgttatcaaacgcaaatgacgttatacaggcgagcaattgagcaaatttggaag
cagcctgtagagcaaacgtatctttacttcttttcacagcagttattaatagaagtaccg
tacagggattga
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integrated database retrieval system
