Oceanobacillus iheyensis: OB1415
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Entry
OB1415 CDS
T00093
Symbol
pdhD
Name
(GenBank) pyruvate dehydrogenase E3 (dihydrolipoamide dehydrogenase)
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
oih
Oceanobacillus iheyensis
Pathway
oih00010
Glycolysis / Gluconeogenesis
oih00020
Citrate cycle (TCA cycle)
oih00260
Glycine, serine and threonine metabolism
oih00280
Valine, leucine and isoleucine degradation
oih00310
Lysine degradation
oih00380
Tryptophan metabolism
oih00620
Pyruvate metabolism
oih00630
Glyoxylate and dicarboxylate metabolism
oih00640
Propanoate metabolism
oih00670
One carbon pool by folate
oih00785
Lipoic acid metabolism
oih01100
Metabolic pathways
oih01110
Biosynthesis of secondary metabolites
oih01120
Microbial metabolism in diverse environments
oih01200
Carbon metabolism
oih01210
2-Oxocarboxylic acid metabolism
oih01240
Biosynthesis of cofactors
Module
oih_M00009
Citrate cycle (TCA cycle, Krebs cycle)
oih_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
oih_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
oih_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
OB1415 (pdhD)
00020 Citrate cycle (TCA cycle)
OB1415 (pdhD)
00620 Pyruvate metabolism
OB1415 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
OB1415 (pdhD)
00640 Propanoate metabolism
OB1415 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OB1415 (pdhD)
00280 Valine, leucine and isoleucine degradation
OB1415 (pdhD)
00310 Lysine degradation
OB1415 (pdhD)
00380 Tryptophan metabolism
OB1415 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
OB1415 (pdhD)
00670 One carbon pool by folate
OB1415 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oih04147
]
OB1415 (pdhD)
Enzymes [BR:
oih01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
OB1415 (pdhD)
Exosome [BR:
oih04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
OB1415 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
HI0933_like
FAD_oxidored
FAD_binding_2
FAD_binding_3
NAD_binding_8
UDPG_MGDP_dh_N
AlaDh_PNT_C
DAO
Amino_oxidase
3HCDH_N
Thi4
Motif
Other DBs
NCBI-ProteinID:
BAC13371
JAMSTEC:
OB1415
UniProt:
Q8CXJ0
LinkDB
All DBs
Position
1458596..1460002
Genome browser
AA seq
468 aa
AA seq
DB search
MVVGDFPVEVDTLVVGAGPGGYVAAIRAAQLGQKVTIVDKGALGGVCLNVGCIPSKALIE
AGHKYENAHGSEDLGIKTDKVEVDFSKVQDWKGSVVNKLTSGVESLLKGNKVDIVKGEAY
FVDANTAKIAGESSSQTYKFKDCIIATGSSPIEIPSFKFSDRVLDSTGALSLKEIPKKMV
VIGSGYVGTELGTAYANFGTEITFLEGAKDILGGFEKQMTQLVKKGLKKKGATIITEAMA
KGVEETKDGVKVSYEVNGKEETIEADYVLVTVGRRPNTDELGLEQMGVKMTDRGHIEIDK
QCKTSVDNIYAIGDIVEGPALAHKASYEGKIAAEAISGEKSEIDYVGIPAVAFTEPELAT
VGLSEQDAKDAGYDVKVGKFPFGANGRALSLNNTEGFLKLITRKDDGLVIGGQIAGPNAS
DMISEIGLAIEAGMTAEDISLTIHAHPTLGEITMEAAEVALGTPIHTM
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaggagattttccggtagaagtagacactctagtcgttggggcaggacctggt
ggctatgttgcagcgattcgtgctgcacaattaggtcaaaaagtaacaatcgtagataaa
ggagctttaggtggagtttgcttaaatgttggttgtattccttctaaagcacttattgaa
gctggccataaatatgaaaatgcgcatggatctgaagatcttggaattaaaacagataaa
gtagaagtagacttttctaaagttcaagactggaaaggttctgttgttaacaaacttact
tcaggtgttgagagcttattaaaaggtaacaaagtagatatcgtaaaaggtgaagcatat
ttcgttgatgcaaatactgctaaaatcgctggagagagcagctctcaaacgtataaattt
aaagattgtatcattgcaacaggttcttcaccaattgaaattccgtcatttaagttctct
gatcgcgtgttagattctacaggcgcattgagcttaaaagaaattccgaagaaaatggta
gtaattggttctggatatgtaggtacagaacttggtactgcatatgctaactttggaact
gaaattactttcttagaaggtgcgaaagacatcttaggtggatttgagaaacaaatgacg
caacttgttaagaaaggccttaagaaaaaaggtgctacaattatcacagaagcaatggct
aaaggcgttgaagaaacaaaagacggtgtaaaagtttcttatgaagtaaatggtaaagaa
gaaactattgaagcagattatgtacttgtaacagtaggtcgtcgtccgaacactgatgag
cttggtttagagcaaatgggtgttaagatgacagatagaggccatattgaaatagataaa
caatgtaaaacaagtgttgataatatctatgcaattggtgatatcgttgaaggacctgca
cttgcacacaaggcttcttatgaaggtaagattgctgctgaagctattagtggtgaaaaa
tctgaaattgactatgtaggaatacctgcagtggcatttacagaacctgaactagcaaca
gtaggtttatctgaacaagacgcgaaagatgctggttatgatgtgaaggttggtaaattc
ccattcggagcaaacggccgtgcactttctttaaataacacagaaggtttcttaaaacta
atcactcgtaaagatgatggattagttatcggtggtcaaattgctggtccaaatgctagt
gatatgatttctgaaattggtttagcaattgaagcaggcatgactgctgaagatatttct
ctaactatccatgctcatccaacactaggtgagattacaatggaagcagcggaagtcgct
ttaggaacaccaattcatactatgtaa
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