Oceanobacillus iheyensis: OB1505
Help
Entry
OB1505 CDS
T00093
Symbol
priA
Name
(GenBank) primosomal replication factor Y
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
oih
Oceanobacillus iheyensis
Pathway
oih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OB1505 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oih03400
]
OB1505 (priA)
Enzymes [BR:
oih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OB1505 (priA)
DNA repair and recombination proteins [BR:
oih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OB1505 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
WHD_PriA_bact
Cas3-like_C_2
Zn_ribbon_6
AAA_30
SLFN-g3_helicase
PIF1
AAA_19
TrwB_AAD_bind
DUF2481
Motif
Other DBs
NCBI-ProteinID:
BAC13461
JAMSTEC:
OB1505
UniProt:
Q8ER26
LinkDB
All DBs
Position
1547354..1549762
Genome browser
AA seq
802 aa
AA seq
DB search
MNIASVIVDVPSSSTNQTFDYCIPEQFQGVIQKGMRVIVPFGPRKIMGFVTGVKDGTSLS
KVKDIIDVLDITPVLTDELLSLSRWVSEKTLSLSITVLQTMLPQVLKSQYSKDLVRETEA
ELPDELEALFASRESIDFDEVGKSTISYRIIKNHIDSGDLSVSYHVQSRITKKYQTMVVP
SKSPIQLEEEIMSLPKNASKQKQLLTYLADNQSEIDKKQLLQETNTSVQTVKAIEEKGII
KTYKKEVFRDPYKDQYIEPTFPLNLTKEQAQAMEPIKYSLDNHINETFLLHGVTGSGKTE
IYLQAIQQVIEEGKEAIVLVPEISLTPQMVNRFKGRFGSKVAVMHSGLSSGEKYDEWRKI
HRQEVQVVVGARSAIFAPFENLGIIIIDEEHETTYKQEDQPRYHARDVAIERAAYHQCPV
VLGSATPSLESFARASKNVYTLLTLQERTNHQTMPKVEIVDMRNELHAGNRSMFSRPLME
QMDERLRRGEQIVLLLNRRGYSTFVMCRDCGHVCECPHCDIALTYHKNTQRLKCHYCSYE
QSVPQTCPECESDLIRYFGTGTQKVEEALAKQIPEARVIRMDVDTTRRKGSHEKLLRQFS
EKKADILLGTQMIAKGLDFANVTLVGVLSADSMLHIPDFRSSERTFQLLTQVSGRAGRHE
LPGEVIVQTYTPEHYSIEFASVYDYDNFYRKEMAMRKAFQYPPYVFLGLITVAHENHARA
IQVTQEIVQMLSNIVEERTTVLGPTPSPVPRIKDRYRYQCMIKYKNEPNLHEYLGHIQDH
FSDEIRKQQMQLTIDMQPYYMM
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
ttgaatatagctagtgttattgtggatgtgccatctagttcaacaaatcaaacattcgat
tattgtattcctgaacagtttcagggggttatccaaaaggggatgagagtaattgtaccc
tttgggccaagaaaaattatgggatttgtgacaggtgttaaggatggaacttctttatca
aaggtaaaagatatcattgatgttttggatataacccctgttctaacagatgagttatta
agtttaagtaggtgggtttctgagaaaacattaagtctttctattactgttctgcaaacg
atgcttccacaggttttaaaatcacagtatagcaaagacttagtgagagagacagaagcc
gaattaccagatgagcttgaggcattatttgctagtcgtgagtcgatcgattttgatgag
gttggaaaatcaaccatctcttatagaataattaaaaatcatattgattctggagattta
tcagtgtcatatcatgtgcaatctagaatcacgaagaaatatcaaacgatggtagttcct
tcaaaatccccaattcagttagaagaggagataatgagtttaccgaagaatgcgagtaaa
caaaagcaattattaacgtatcttgcagataatcagagtgaaatagataagaaacaacta
ttacaagaaaccaatacttctgtacaaacagtaaaggcaattgaagaaaagggaataatc
aaaacctataagaaagaagtctttcgtgatccatacaaagatcaatatatcgaacctact
ttcccactaaatctaacgaaagaacaagcccaagctatggaaccaataaaatatagtctg
gataaccacatcaatgaaactttcttattacatggggtaactggtagtgggaaaactgag
atttacttacaagcgattcaacaagtaatcgaggaaggtaaagaggctattgtgcttgta
ccagaaatttctctaacacctcaaatggtaaatagatttaaaggaagattcggtagtaaa
gtagcagtaatgcatagtggattatcttccggagaaaagtacgatgaatggaggaaaatt
catcgacaagaagtacaggtagttgtaggtgctcgttcagcaatatttgctccttttgaa
aatttaggaataattattatagacgaagagcatgaaacgacttataaacaagaggatcaa
ccccgttaccatgcaagagatgtcgcgatagaaagagcagcgtatcatcaatgtccggtt
gtgcttgggagtgccactccatcgcttgaatcctttgctagagcctccaaaaatgtatat
accctattaacattacaggagagaaccaatcatcaaaccatgccaaaggttgagattgta
gatatgcgtaatgaattacatgctggtaatcgatcgatgttttctcgaccattaatggaa
cagatggatgaaagattacgtcgcggagaacaaattgtacttttattaaatcgtcgtgga
tattctacatttgtcatgtgtagagattgtggacacgtatgcgaatgtccccattgtgat
attgcactgacttatcataaaaatacacagcgtttgaaatgccattattgttcttatgaa
caatcggtgccacagacttgccctgagtgtgaaagtgatttaattcgatatttcggtaca
ggtacacaaaaagtagaagaagctttagcaaaacaaatacctgaggctagagtaattagg
atggatgtcgatacaacaagaagaaaaggttcccatgaaaaactcctgagacagttttcc
gagaaaaaggcagatattttattagggacacaaatgattgctaagggtcttgattttgct
aatgttacattagtgggggtactttctgcagactcgatgttacacatcccagactttcga
tcatcggaacgaaccttccaattactaacgcaggttagtggaagagctgggagacatgag
cttccaggggaagtaattgttcagacgtatacaccagaacattatagtattgagtttgca
tctgtgtatgattacgacaacttctatcggaaagaaatggcgatgagaaaggcatttcaa
tatccaccttatgtgtttttaggattaataacagtagctcatgaaaatcatgcgagagca
attcaagttacccaggaaattgtacagatgctttccaatattgtggaagaaaggactaca
gtattaggtccaaccccatctccagtgcctaggatcaaagatagatatcgctatcaatgc
atgataaaatacaaaaatgagccgaatttgcatgaatatctaggacatatacaggatcat
ttttcggatgaaattagaaagcaacaaatgcaattaactatcgatatgcaaccgtattat
atgatgtaa
DBGET
integrated database retrieval system
