Oceanobacillus iheyensis: OB1944
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Entry
OB1944 CDS
T00093
Symbol
sigA
Name
(GenBank) RNA polymerase sigma-43(-A) factor
KO
K03086
RNA polymerase primary sigma factor
Organism
oih
Oceanobacillus iheyensis
Pathway
oih02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OB1944 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oih03021
]
OB1944 (sigA)
Transcription machinery [BR:
oih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OB1944 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
AhpC-TSA
DUF1118
Motif
Other DBs
NCBI-ProteinID:
BAC13900
JAMSTEC:
OB1944
UniProt:
Q8EPY6
LinkDB
All DBs
Position
complement(1969918..1971060)
Genome browser
AA seq
380 aa
AA seq
DB search
MAEQKPSHMKEEVTEVTETTEVTTLEQAKNRLLEIGKKRGSLAYEEVADGLSNFELEPEQ
MDEFYEYLEEQGVDVIGESEDDPEMQKIAKEEEFNLNDLSVPLGIKINDPVRMYLKEIGR
VNLLSAAEEIDLASSIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGL
IKAVEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRSLLQ
DLGREPTPEEIGEEMELGPDKVRDILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAISPS
DHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEA
KALRKLRHPSRSKRLKDFLD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacaaaagccttcgcatatgaaagaagaagtaacagaagtaacggaaacaaca
gaagtaactacattggaacaggctaagaatagacttttagaaattggtaagaaacgcggt
tcattagcctatgaagaggtggcagacggtttatctaactttgagcttgaacctgagcag
atggacgaattttatgagtacctagaagaacagggtgttgatgtgataggtgagtcggaa
gatgaccccgaaatgcagaaaatcgcaaaagaagaggaatttaatcttaatgatttaagt
gtaccattaggtattaagataaatgaccctgttcgtatgtacttaaaggaaattggcaga
gtcaatctattgtctgctgcagaagaaatcgatcttgcttcaagtattgaagaaggcgat
gaagaagcaaaaagacgtctagctgaagcgaacttacgattagtagttagtatagcaaaa
cgttatgttggacgaggaatgttattcttggatcttatccaagaaggaaatatgggcctt
atcaaagctgttgagaagtttgattatcgtaaagggtttaaatttagtacgtatgccact
tggtggatacgtcaggcaattacccgtgcaatagctgaccaagcaagaacaatccgaatt
ccagttcatatggttgaaacgattaataagttgattagagttcaacggtcattgttacaa
gatctaggacgagaaccaacaccagaggaaattggtgaggaaatggaattaggtccggat
aaggtaagagatattcttaagattgctcaagaaccagtatcattagaaactccgattgga
gaagaagatgattctcatttaggcgactttatagaggaccaagaagcgatttccccgtca
gaccatgcagcttatgaattgctaaaagaacagttagaagatgttttagatacgctaact
gatcgagaagaaaatgtccttcgattacgatttggacttgacgatggacgaactagaaca
ttagaagaggtaggaaaagtcttcggagttactcgtgagcgaattcgacaaatagaggca
aaagcactccgtaaattaagacaccctagtcgaagcaagcgtcttaaagactttttagat
taa
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