Oceanobacillus iheyensis: OB2014
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Entry
OB2014 CDS
T00093
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
oih
Oceanobacillus iheyensis
Pathway
oih04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
OB2014 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oih03016
]
OB2014 (trmU)
Enzymes [BR:
oih01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
OB2014 (trmU)
Transfer RNA biogenesis [BR:
oih03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
OB2014 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
ATP_bind_3
QueC
DUF7411
Arginosuc_synth
Asn_synthase
Motif
Other DBs
NCBI-ProteinID:
BAC13970
JAMSTEC:
OB2014
UniProt:
Q8CXC7
LinkDB
All DBs
Position
complement(2038672..2039787)
Genome browser
AA seq
371 aa
AA seq
DB search
MKNNKDTRVVVGMSGGVDSSVAALLLKQQGYDVVGIFMKNWDDTDEFGVCTATEDFDDVV
RVCNQLEIPYYSVNFEKQYWDKVFTYFLDEYKAGRTPNPDVMCNKEIKFKAFLDHALALG
ADYLATGHYAQVRRDKNGRVEMLRGNDENKDQTYFLNQLSEDVLDKVMFPLGHLPKSEVR
KIAKEHELVTAEKKDSTGICFIGERNFKEFLSEYLPAQPGEMQTLDGIVKGSHDGLMYYT
LGQRQGLGIGGSGDPWFVVGKNLTDNILYVGQGYENDYLYSNALVATDINWIQPDKISDT
FNCTAKFRYRQQDSEVNVTIKSENEVYVAFKEDQRAITPGQAVVFYDGEVCLGGGTIDTI
IKNDHKLDYVG
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataacaaagatacacgtgtagttgttggaatgagtggaggagtcgattcttct
gtagctgctttactacttaaacaacagggttatgatgttgtaggtatcttcatgaaaaat
tgggatgatactgacgaatttggagtttgtacagctacggaagactttgacgatgtagta
cgtgtatgtaatcaactagaaattccgtactactccgttaactttgaaaaacaatattgg
gataaagtatttacgtactttttagatgaatataaggcaggaagaacgccaaatccggat
gttatgtgtaataaagagattaaattcaaagcatttttagatcatgcattggctttagga
gcagattatttagcaactgggcattatgcacaagttcgtcgcgataaaaatggccgtgtt
gaaatgctaagaggtaacgatgaaaataaagatcaaacgtactttttaaatcaattatcg
gaagatgtactggataaagtgatgtttcctttggggcatttaccaaaatcggaagtccgt
aaaattgcaaaggaacatgagctagtaacagcagagaaaaaagattctactggtatttgt
tttataggagaacgaaatttcaaggaatttctaagtgaataccttcctgcacaaccaggt
gaaatgcaaacactagatggtattgtgaaaggtagccacgacggtttaatgtattataca
cttggtcagcggcaaggccttggcatcggtggttctggggacccttggtttgtagttggt
aaaaacttaactgataacattttatacgttggacaaggatatgagaatgattatttgtat
tcgaatgcacttgtagctacagatataaactggatacaacccgataaaatttcagataca
tttaactgcactgcaaaattccgttatcgtcaacaagatagtgaagtaaatgtaacaatc
aaatcagaaaacgaagtatatgtagcatttaaagaagaccagcgggcaattactccagga
caagctgttgtgttctatgacggtgaagtgtgtcttggtggaggaacgattgatacaatt
ataaaaaatgatcataaattagattatgtaggataa
DBGET
integrated database retrieval system
