Oceanobacillus iheyensis: OB2026
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Entry
OB2026 CDS
T00093
Name
(GenBank) single-strand DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
oih
Oceanobacillus iheyensis
Pathway
oih03410
Base excision repair
oih03430
Mismatch repair
oih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OB2026
03430 Mismatch repair
OB2026
03440 Homologous recombination
OB2026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oih03400
]
OB2026
DNA repair and recombination proteins [BR:
oih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
OB2026
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OB2026
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OB2026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Cecropin
DSPc
Glutaredoxin2_C
ThiG
Motif
Other DBs
NCBI-ProteinID:
BAC13982
JAMSTEC:
OB2026
UniProt:
Q8EPR4
LinkDB
All DBs
Position
complement(2052597..2054912)
Genome browser
AA seq
771 aa
AA seq
DB search
MLDSKMKWRYNQVEDHNSSLLKDTNLSPLLKQLFIQRGITTNEEVQRFLSPQIDDLHHPF
LLKDMEKAVQRIHKAIQNEEKILVFGDYDADGVSSTAVMLKALTELGATCDFYIPNRFTE
GYGPNEAAFRNASEQGYKVIITVDTGITSVHEANIANELGMDLIITDHHEPQTNIPESFA
IIHPKCSPEYPFNELAGVGVAFKFAEALLGYFPSQFLSYTAIGTIADLVPLFDENRVLAS
YGLKELRATTDVGLKALIQVCQIEDLDEQSIGFSIGPRLNAVGRLQDADLAVELLLTEDM
EAALEIANEINKINDERKKVVQRIVSEADQIVNSKPERRIIVVSNEAWNQGVLGIVASHL
VRKYDRPAIVLSTQPENGVVKGSARSIPAFDLFEGCMRMRDLFTHFGGHSQAAGMTLPIE
NVDKLELQLDDILNNELAEEDLKQELEISGQLNMENINIELIKDISKLAPFGMKNPKPVF
QIKEIPSDIKRIGSKKNHLKMQFRKNSTRMDAIGFGWGDAYNQIAPHTPIQIAGELSINE
WNGNQTAQLMIQDMKIDEWQLFDYRGKRRENIIPHVEEDAVIISNQTESITSEVSHVSYN
SDIISDHNRCRTVYINDLPKQLDDLKYVINYFQPKKIVVCYEVESSNYLFAFPSREDFVW
YYALIKKQGPFHVAANVESLKKHKGWNEDKINFMSEVFSDLGFVKIKDGKVTALDNPLKK
DLTESTVYQAREKQSEIEKQLYYSNYEDLRKWFMESMDYLENPREEATHGI
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttagatagtaaaatgaaatggagatataatcaggtagaagatcataacagttcttta
ctaaaagacactaatctatctcctttattgaagcagttgtttattcaacgaggaataaca
acaaatgaagaggtgcaacgctttctatctccgcaaatagatgatctacatcacccattt
cttttaaaggacatggaaaaagcggttcaacgaatacataaagcaatacagaatgaagaa
aagattctagtatttggtgattatgatgcagatggtgtaagctcaacagcagtaatgtta
aaagcattaactgaattaggggctacatgtgacttctatattcctaatcgatttacggag
ggctatggacctaatgaagctgcatttcgtaatgcatctgaacaaggatacaaagtaatt
attactgtagatactggtataacatccgttcatgaagcaaatatagctaatgaactaggt
atggatttgattattactgatcatcatgaacctcaaaccaatatacctgaaagcttcgca
atcattcatccaaagtgttctcccgaatacccgtttaatgaactagctggtgttggagta
gcttttaaatttgcagaagctctcctggggtattttccgtctcagtttttatcatacacc
gcaattgggactattgccgatttagtaccgttatttgatgagaatagagtattggcttct
tacgggttaaaggaactacgagcgacaacggatgttggtttaaaagcattgatacaagta
tgtcaaatagaagatttagatgaacaatcaataggtttttctataggaccacgactgaat
gctgttggtagattacaggatgctgatttagcagttgaactacttcttactgaagatatg
gaagcagctttggagatagccaatgaaattaataaaataaatgatgaacgaaaaaaagta
gttcagcggattgttagtgaggccgatcaaattgtgaattccaaaccagaaagaagaatt
attgtggtctcgaatgaagcttggaatcagggcgttctcggtattgtagcttcacatcta
gttcgaaagtacgatcgaccagcaattgtgttatcaacccaaccagaaaatggagtcgta
aaaggttctgctcgaagtattccagcttttgatttatttgaaggttgtatgcgaatgaga
gacttatttacacattttggtggacactcgcaagctgccggtatgacgcttccgatagaa
aatgtagataagttagaacttcaacttgatgatatattaaataatgaacttgcggaggaa
gatttaaaacaggaattggaaataagcgggcaattaaatatggaaaatattaatatagaa
ttaataaaggatatttcgaagcttgctccttttggaatgaaaaatcctaagcctgtcttt
caaattaaagaaattccttcagatataaagcggattggaagcaaaaagaatcatttaaaa
atgcagttccgtaaaaattctactcgtatggacgctattggcttcggttggggagatgct
tataatcaaattgccccccatacaccgattcaaattgcaggagaactatccataaatgaa
tggaatggtaaccagactgcccaattaatgatacaagatatgaagattgacgaatggcag
ttgtttgattacagaggtaaacgtagagaaaatatcatcccgcacgtagaagaagatgcg
gttatcatatctaatcaaacagaatctattacaagtgaagttagtcatgttagttataac
agtgatattattagcgaccataacagatgccgtacggtttatataaatgatcttcccaaa
caattagatgacttaaaatatgtaatcaattattttcaacctaagaagattgtcgtgtgt
tatgaagttgaatcaagtaattatttatttgcatttcctagtagagaagatttcgtgtgg
tattatgctttaataaagaaacaaggcccattccatgttgctgccaatgtagaatcgtta
aaaaagcacaaaggctggaatgaagataaaattaattttatgtctgaggtgttttctgat
ttaggctttgttaaaataaaagatggtaaagttacagcattggataatccactcaaaaaa
gatttaactgaatcaaccgtttatcaagcacgagagaaacaatctgagatagaaaaacaa
ctgtattattcaaattatgaggatttaagaaaatggtttatggaaagtatggattatttg
gaaaatccgagggaggaagcaacacatggaatttaa
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