Oceanobacillus iheyensis: OB2036
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Entry
OB2036 CDS
T00093
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
oih
Oceanobacillus iheyensis
Pathway
oih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OB2036 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oih03400
]
OB2036 (ruvB)
Enzymes [BR:
oih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OB2036 (ruvB)
DNA repair and recombination proteins [BR:
oih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OB2036 (ruvB)
RecFOR pathway proteins
OB2036 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
AAA_14
DUF815
nSTAND3
AAA_3
RNA_helicase
NB-ARC
Rad17
AAA_24
AAA_18
AAA_17
AAA_25
TsaE
Resolvase
ABC_tran
IstB_IS21
NPHP3_N
AAA_28
NACHT
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
BAC13992
JAMSTEC:
OB2036
UniProt:
Q8EPQ6
LinkDB
All DBs
Position
complement(2064694..2065698)
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AA seq
334 aa
AA seq
DB search
MDDRMIDGELQDQDVEIELSLRPSTLSQYIGQDKVKENLTIFIQAAKMREEPLDHVLLYG
PPGLGKTTLASIISYEMGVQFRSTSGPAIERAGDLAAILSSLEPGDVLFIDEVHRLPRSV
EEVLYAAMEDFFIDIVIGTGPSARSVRIDLPPFTLVGATTRAGLLSAPLRDRFGVLSRLE
YYEIKDLCNIVERTADIFNMPISSEAAIEVARRSRGTPRIANRLLKRVRDISQVKGEEEI
SLESTKQALEMLQVDDAGLDHVDHKLLTGIIEGFSGGPVGLDTIAATIGEESQTIEEVYE
PFLLQLGFIQRTPRGRVITSKAYDHLGIKRTGED
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcgaatgatagacggagagcttcaagatcaagatgtagagatagaacttagt
ctacgtccttcgacgctgtcccaatatattggacaggataaagtgaaagaaaacctgact
atctttattcaagcagcaaaaatgcgtgaagaaccgttagatcatgtgttattatatggt
cctccaggattaggaaaaacaaccctagcatcaatcatatcttatgagatgggggttcaa
tttcgatctacttctggtcccgctattgaaagagctggagacttagcagcgatattatct
tcccttgaaccaggagatgttttatttattgatgaagtgcaccggcttcctagatcggta
gaagaagtgctctatgctgctatggaagatttctttattgatattgttattggtacaggc
ccaagtgcacggtcggtaagaattgatttacctccgtttacgttagtaggagctacgaca
agagctggtttattaagtgcccccttaagagatagatttggagtacttagtcgtcttgaa
tattatgagataaaggatttatgcaatattgtggaacgtactgctgatatatttaatatg
ccaatttcttcagaagcagccattgaagtggctagacgatcaaggggaactccgcgaatt
gctaatcggcttttaaaacgtgttagagacatatctcaagtaaaaggagaagaggaaata
agtctagaatcaacaaagcaagcattagaaatgcttcaagtagacgatgcaggattagac
cacgttgatcacaagttgcttacaggaattattgaaggatttagtggtggaccagtaggt
ttagatacaatcgctgctacgattggagaggaatctcaaacaattgaagaagtttatgaa
cccttcttattacagcttggttttattcaacgtacacctaggggaagagtcattacatca
aaagcgtatgatcatttaggaataaaaaggactggtgaagattaa
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