Opacimonas immobilis: ACM613_03355
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Entry
ACM613_03355 CDS
T11110
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
oim Opacimonas immobilis
Pathway
oim03030
DNA replication
oim03410
Base excision repair
oim03420
Nucleotide excision repair
oim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACM613_03355 (polA)
03410 Base excision repair
ACM613_03355 (polA)
03420 Nucleotide excision repair
ACM613_03355 (polA)
03440 Homologous recombination
ACM613_03355 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oim03032
]
ACM613_03355 (polA)
03400 DNA repair and recombination proteins [BR:
oim03400
]
ACM613_03355 (polA)
Enzymes [BR:
oim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACM613_03355 (polA)
DNA replication proteins [BR:
oim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACM613_03355 (polA)
DNA repair and recombination proteins [BR:
oim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACM613_03355 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACM613_03355 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DNApol_Exo
WH_GTF3C1_N
Obc1_cap
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XPD36220
LinkDB
All DBs
Position
complement(707685..710483)
Genome browser
AA seq
932 aa
AA seq
DB search
MSDSPAPFILVDGSSYLFRAFHGMPPMSNSQGQATHAIYGVINMLKSLLNTYQPTHIGVV
FDAKGKTFRDDIYPEYKANRPPMPDDLRSQIAPLHAIIKAMGLPLLVEENVEADDVIGTL
CKKASAKGIPTLVSTGDKDMAQLVNEHVTLVNTMTNVVMDPAGVVEKFGVGPELIIDLLA
LQGDKVDNIPGVPGVGAKSALGLLQGIGGIEDIYNNLDQIQTLAFRGAKTLAPKMLQYEK
EARLSYELATIAVDLDLPYEVTDLDIKAPDNDALAELYQTYEFKRWYKEVSGDNFTPKVT
SPVIAVTSPDTTHADTSTPTVPTVEQPPINRDAYEVVLSEAHLQQWIERCEQAPLFAIDT
ETTSLHYREAEIVGISLCVGPNQACYIPVAHDYPGAPEQLPREQVLAQLKPLLENPKPQK
IGHNIKYDQNVLANYDIALGGVTFDTMLESYALNSVQKHNMDDLSLSQLGHETIKYEDIA
GKGAKALTFNQIDLEVAAPYAAEDADITYRLHQVLWPQLVATPALANVAHKLEVPLSNVL
AQMEQNGVLIDSQRLAQHSQALAVRIMELEKHVHELAGESFNLGSPKQLQHILFEKMGLP
VVKKTPKGAPSTAEEVLQELAMQYELPAAIMEFRGLTKLKNTYTDKLPQMIDHRSGRVHT
SYQQAVAATGRLSSTEPNLQNIPIRNEEGRKVRKAFIARPGYKVVAADYSQIELRIMAHL
SQDEGLLNAFSKGLDVHRATAAEVFGVALEDVATEQRRAAKAINFGLIYGMSAFGLAKQL
NIPRGEAGQYINTYFERYPGVKHYMESTREAAKITGYVETVYGRRLYLPAIKSSNGAQRA
GAERAAINAPMQGTAADIIKLSMLAVADYIKQLDNQDVYMLMQVHDELVFEIKEDSLDTH
VPNIIRIMENAVSLSVPLIVEADVGDNWDEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagtcctgctccattcattcttgtcgatggttcatcttacctattccgcgca
tttcacggcatgccgccaatgtccaactcgcaagggcaagccactcatgccatttatggt
gtgatcaacatgctcaaaagtcttctaaacacttatcagccaacgcatattggggtggtt
tttgatgccaaaggtaaaacattccgcgatgacatttatcctgaatacaaagcgaaccga
cctcctatgccagatgacttgcgtagtcaaattgcgccattacatgcaattataaaagca
atggggttacccttgttagtagaagagaacgttgaagcagatgatgtgattggcaccttg
tgtaaaaaagcctcggccaaggggatcccaactcttgtaagtacgggtgacaaagatatg
gcacagttggttaatgagcacgttactctagtcaataccatgaccaatgtcgtgatggat
ccagctggcgttgttgaaaagtttggcgttggtccagaactcattattgatttattagcg
ttacaaggtgataaggtcgacaacattcctggagtccctggggtaggagccaaatctgca
ttaggtctattgcagggtattggtgggattgaagatatttacaacaacttagatcaaatt
cagacgttggcgtttcgcggggccaaaacacttgcacctaaaatgttgcagtatgaaaaa
gaagcaagattgtcatacgagcttgccacgatcgcggtggatcttgacctaccttacgaa
gtgaccgatttagatatcaaagcaccggataatgatgcgcttgctgagctatatcagaca
tatgaattcaagcgctggtacaaggaagtcagtggtgacaatttcactccaaaagtaacc
tcaccagtaatcgcagtgacttcaccagataccacccatgccgatacgtctactccgacc
gtaccaacggtagagcaaccaccaatcaatcgcgatgcgtatgaagtggtattaagtgaa
gcacacttacaacagtggattgagcgctgtgagcaagcgcctttatttgccattgatacg
gaaaccacatcattgcattatcgcgaagctgaaatagttggtatttctttgtgtgttggt
cccaatcaagcctgctacatacccgttgcgcatgattatcctggagccccggagcaattg
ccaagagagcaagtgttagcacagttaaagccattactggaaaaccccaagccacagaaa
atcggccacaacatcaaatacgatcaaaatgtactggccaattacgacatcgctctaggc
ggtgtcacctttgataccatgctggagtcgtatgcactcaatagtgtacaaaaacacaac
atggatgatttgtcgttgagccagcttggtcatgaaaccattaagtatgaagatattgcc
ggtaaaggcgcgaaagccttaacgtttaatcagattgatttagaggtagctgcaccttat
gctgcagaagatgcggatattacgtatcgcttacatcaagtactctggcctcagctggtt
gccactccagcactagcgaatgtggcacacaaactcgaagtgccattgtctaatgtactt
gcgcaaatggaacaaaacggtgtgttgatcgactcacagcgcctagctcaacactctcaa
gcgttggcagttcggatcatggagctcgaaaaacacgtacatgaactggctggtgaatca
tttaatttaggctctcccaagcaacttcagcatatcttatttgaaaagatggggctgccc
gttgtcaaaaagactcctaaaggtgccccatctaccgctgaagaagtacttcaagaactg
gctatgcagtatgaactgccagcagccattatggagtttcgtggcttaaccaagctcaaa
aacacgtataccgataaattaccacagatgatcgaccatcgcagtgggcgtgtgcacacc
tcatatcagcaggccgtggcagcaactggtcgcttatcttccacggaacctaatctgcaa
aacatacccatccgcaatgaggaaggacgcaaagtgcgcaaagcctttattgctcgtcca
ggttacaaagtggttgcggcagactattcacaaattgaattgcggatcatggcgcattta
tcacaagacgaagggttgttgaatgcgttttccaaagggcttgatgtgcatagggctaca
gctgccgaagtatttggcgtggctttagaggacgttgcaaccgaacaacgtcgtgcggca
aaagccataaactttggtttgatctacggtatgtccgcatttggactggctaaacaactc
aatattccgcgtggtgaagctggtcaatacatcaacacctatttcgagcgctatccgggt
gtaaaacattacatggaatcgacacgggaagcggcaaaaattacaggttatgtggaaaca
gtttacggcagacgtttatacttaccagccatcaaatcctccaatggcgcacaacgagca
ggagctgaacgtgcggcaatcaatgcacccatgcaaggaactgctgcggatattattaaa
ttatcgatgctcgcggtggccgattacatcaagcaattagacaaccaagacgtctacatg
ttaatgcaagtacacgatgaactagtgtttgaaatcaaagaggattcacttgatacgcac
gttcctaacattattcgaattatggagaatgccgtatcgctctctgtccccttgattgtg
gaggccgacgtgggtgataactgggacgaagcccattaa
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