Opacimonas immobilis: ACM613_03780
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Entry
ACM613_03780 CDS
T11110
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
oim Opacimonas immobilis
Pathway
oim00300
Lysine biosynthesis
oim00470
D-Amino acid metabolism
oim01100
Metabolic pathways
oim01110
Biosynthesis of secondary metabolites
oim01120
Microbial metabolism in diverse environments
oim01230
Biosynthesis of amino acids
Module
oim_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
oim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACM613_03780 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACM613_03780 (dapF)
Enzymes [BR:
oim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACM613_03780 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
YNQ4_N
CntK_N
Motif
Other DBs
NCBI-ProteinID:
XPD36714
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All DBs
Position
802635..803444
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AA seq
269 aa
AA seq
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MHGCGNDFMVIDSVTQNVYLSPEKIKQLADRNFGVGFDQLLLVEPPYDPEQDFHYRIFNA
DGSEVEQCGNGARCFARFVKAKGLINKNRIAVSTKSGNIVLYLERDGQVTVNMGMPNFKP
EAIPLQAQKQEKTYIIRDNEQTFFVGAVSMGNPHCVIMVDDVDEYDVLGVGERLESHERF
PARVNVGFMQVISRKHIKLRVFERGVGETLACGTGACAAMVVGHVQDKLDREVKVSLPGG
DLLIKWPNADQPVKMTGPAEIVFEGCIPL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcacggatgtggcaatgactttatggtcatcgatagcgtcacacaaaatgtgtatttg
tcaccggaaaaaatcaaacagcttgccgaccgtaattttggtgttggctttgaccagctg
ttgttagttgaaccgccttatgatccggaacaagattttcactatcgcatatttaatgct
gatggcagtgaagtcgagcaatgcggcaatggcgcgcgttgttttgcccgatttgtcaaa
gccaagggactgatcaacaaaaatcgcattgcggtgagcaccaaatccggcaatattgta
ttgtatctcgagcgcgatgggcaggtcacagtcaatatgggtatgcctaatttcaagcct
gaggccattccgttgcaggcgcaaaaacaagaaaaaacctacattattcgtgataatgag
caaaccttttttgtcggtgcggtctcaatggggaatccgcattgcgtgatcatggtcgat
gatgtggatgaatatgatgtgcttggtgtaggcgagcgtttagagtcgcatgagcgtttt
cctgctcgtgtcaatgttggttttatgcaggttatttctcgcaagcacatcaaactgcga
gtatttgagcggggggtaggcgagaccttagcttgtggtacaggcgcatgtgccgcgatg
gtcgtgggacatgtgcaagacaaactcgatcgtgaggtcaaagtcagcttgccaggagga
gatctactcatcaaatggcctaatgccgatcagccagtcaaaatgacaggacccgcggaa
atcgtttttgaaggatgcataccactatga
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