Opacimonas immobilis: ACM613_04255
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Entry
ACM613_04255 CDS
T11110
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
oim Opacimonas immobilis
Brite
KEGG Orthology (KO) [BR:
oim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oim03009
]
ACM613_04255 (dbpA)
Enzymes [BR:
oim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACM613_04255 (dbpA)
Ribosome biogenesis [BR:
oim03009
]
Prokaryotic type
rRNA helicases
ACM613_04255 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
CMS1
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XPD36384
LinkDB
All DBs
Position
907026..908399
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AA seq
457 aa
AA seq
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MKFNALALRPELLEGVAQLGYETATDIQASTLPLMLDGKDVLAQAKTGSGKTAAFALGVL
NDLDAESTYTHALVLCPTRELADQVAEQMRLLAKRIDNVKITCLYGGVPMPGQIATLRHR
PHIIVGTPGRVMDHLLKHRVHLKQLKHLVLDEADRMLDMGFADELEVIFGKLPAKRQTAL
FSATYPDTIAAISESIQHNPHKVVVETHHQAHKIEQVAYKVLPHVRDQAVATILSHYQAQ
SAIVFCATKAETFALTQFLQGKSISAVALNGDIEQRERTQVLTRFAHRSALVLVATDVAA
RGLDIDAVELVINYSLGEELDTYIHRVGRTGRGDATGRAVTLVTDDELGLLRRTADHAQV
VLKPKGIESLRFHANRIAEPEYVTLSIDGGKRQKLRPGDILGSLTKEAGIPGEDIGKINV
TNQVSFIAVKIRSVKRALSQLREGKIKGKKFRARRCV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaatgcactggccttgcgccctgaattgttagagggcgttgcccagttaggc
tacgaaaccgcaaccgacatacaggcaagtacattgccgctgatgctggatggcaaagat
gtgttggcacaagccaaaacgggcagtggtaaaaccgccgcgtttgcgcttggcgttcta
aacgatttggatgcagaatcaacctatacccatgcgctggtgttgtgtccaacccgagag
ctcgccgatcaagtagcagagcaaatgcgtttactagcgaagcgcatcgataatgtcaaa
atcacctgcctatatggcggtgtgccgatgccaggacaaatcgctaccctaaggcatcgt
ccgcacattatcgtgggcacaccaggtcgggtgatggatcatttgctcaaacatcgcgtg
catttaaaacagctcaagcatctggtgttggatgaagccgatcgtatgctcgatatgggg
tttgctgatgaattggaggtgatttttggcaaattgcccgccaaacgtcaaactgcactg
ttctcggcaacgtaccctgatacgattgctgccatcagtgaatcgatacaacacaaccca
cacaaagtcgtggtagaaacccaccatcaagctcacaaaatagaacaagtcgcttacaaa
gtcttgccacatgtgcgtgaccaagcagtagcgaccatactgagtcactatcaagcgcaa
tcggctatcgtgttttgtgcgaccaaagcggaaacctttgctttgacgcaatttttgcag
ggtaaaagcatttccgcagtcgcactcaatggtgatattgagcagcgcgaacgcacccaa
gttttaacgcgttttgcgcatcgctccgctctggttttagtggccacggatgtcgcggca
cgtggcttggatattgatgcagtcgagttagtgattaattattcgttaggtgaagagctt
gatacctatattcaccgagttggacgcacggggcgtggcgatgcgactggacgtgcagtg
acattggtcaccgatgacgaattgggcttgttgcgtcgcaccgcggatcatgctcaagtg
gtgttaaagcccaaaggtattgagtcgttgcgctttcatgcgaatcgcattgcagagccg
gaatatgtcacgttgagtattgatggcggtaaacggcaaaaacttcgtccaggcgatatc
ctaggatcactgaccaaagaagctggcattccgggtgaagatattggcaaaatcaatgtg
accaaccaagtatcgttcattgcagtcaaaatacgcagtgtgaaacgcgcgctatctcag
ttgcgagaaggcaaaatcaaaggcaagaagtttcgagcaaggcgctgtgtgtga
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